Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AL024507.1-201ENST00000412741 274 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 RPS7P12-201ENST00000422385 582 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AL596268.1-201ENST00000427910 1048 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC009518.3-201ENST00000438972 253 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 RPL12P11-201ENST00000439970 501 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AL845321.1-201ENST00000444603 348 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 MTATP6P26-201ENST00000445926 662 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 RPS26P11-201ENST00000463445 348 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 RPS26P6-201ENST00000475156 348 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 RBBP4P1-201ENST00000502424 1276 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC021146.5-201ENST00000503544 545 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AL132640.1-201ENST00000559594 619 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC009948.4-201ENST00000604692 675 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AL096803.3-201ENST00000609032 532 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC021422.1-201ENST00000621212 473 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC068057.2-201ENST00000624047 895 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 ZNF806-201ENST00000438300 1774 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC011815.2-201ENST00000618230 2021 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 RNU6-697P-201ENST00000363348 107 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 RNA5SP474-201ENST00000391234 90 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AL033519.1-201ENST00000407266 307 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC013262.1-201ENST00000426710 252 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 RPL34P27-201ENST00000428810 349 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 RPS26P4-201ENST00000431743 355 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 GAPDHP75-201ENST00000433910 943 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 CHCHD4P5-201ENST00000436684 427 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 RPEP4-201ENST00000437636 602 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 WDR82P2-201ENST00000444540 928 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 MTND2P6-201ENST00000455337 1030 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 CCNJP2-201ENST00000457810 1163 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC236972.4-201ENST00000458091 963 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC104982.1-201ENST00000478775 574 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 RN7SL502P-201ENST00000481857 290 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 RN7SL868P-201ENST00000485915 303 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC096661.1-201ENST00000515870 822 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 KCTD9P6-201ENST00000522306 950 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC084337.1-201ENST00000524809 686 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC024405.1-201ENST00000532521 1042 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC139103.1-201ENST00000534696 1030 ntBASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.13□□□□□ -1.43
AMBRA1Q9C0C7 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms