Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 RNA5SP514-201ENST00000363717 111 ntBASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 AL161636.2-201ENST00000445179 927 ntBASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 AC023141.9-201ENST00000458734 412 ntBASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 RPL34P33-201ENST00000486062 334 ntBASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 AC027667.1-201ENST00000545814 304 ntBASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 MIR6719-201ENST00000622428 87 ntBASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 AC008627.1-201ENST00000517511 1704 ntBASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 ZNF840P-201ENST00000504759 1996 ntBASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 MTND6P12-201ENST00000428247 522 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 GAPDHP75-201ENST00000433910 943 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 PTMAP6-201ENST00000439110 327 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 SLC25A51P1-201ENST00000468432 871 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 RN7SL860P-201ENST00000473738 223 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 RNA5SP434-201ENST00000516647 121 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AL137246.2-201ENST00000613439 662 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AC126175.1-201ENST00000617041 758 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AL596275.2-208ENST00000641192 594 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AC093225.1-201ENST00000506867 1408 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AC027575.3-201ENST00000583058 2747 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 DPPA2P3-201ENST00000411853 655 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 MIR4489-201ENST00000578869 62 ntBASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM3Q8TF72 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SHROOM3Q8TF72 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SHROOM3Q8TF72 ZNF101P1-201ENST00000435701 1720 ntBASIC6.21□□□□□ -1.41
SHROOM3Q8TF72 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.21□□□□□ -1.41
SHROOM3Q8TF72 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SHROOM3Q8TF72 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 U3.25-201ENST00000391209 220 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 RPL35AP31-201ENST00000418340 337 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 PPIAP7-201ENST00000454070 489 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AL157777.1-201ENST00000468100 304 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 RN7SL717P-201ENST00000478343 297 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AC114781.3-201ENST00000512083 142 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 RNA5SP206-201ENST00000516703 121 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AP000620.1-201ENST00000527147 504 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AC244502.2-201ENST00000543361 851 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms