Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 RNA5SP514-201ENST00000363717 111 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 RNU6-891P-201ENST00000384280 111 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 MIR551B-201ENST00000384984 96 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 RN7SKP38-201ENST00000410782 309 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 UBE2V1P14-201ENST00000415815 558 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AL360013.1-201ENST00000419031 858 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 RPS17P17-201ENST00000419392 409 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 RPL12P49-201ENST00000441100 121 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC092601.1-201ENST00000444526 383 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC073476.1-201ENST00000452854 407 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 CEACAMP11-201ENST00000455211 583 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC103563.5-201ENST00000455643 364 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 RN7SL221P-201ENST00000466190 281 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 GM2AP2-201ENST00000491764 562 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC117500.1-201ENST00000497352 755 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 SNORA81.2-201ENST00000516868 170 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC036111.2-201ENST00000533247 901 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC124891.1-201ENST00000536322 519 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AL121839.1-201ENST00000556233 1185 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC037479.1-201ENST00000558361 625 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 MIR4420-201ENST00000583944 77 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 NPIPB1P-202ENST00000588786 828 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC020915.5-201ENST00000596836 964 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC091167.5-201ENST00000605689 894 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 OR7E91P-202ENST00000642062 1198 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AOX3P-204ENST00000491025 2107 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 RNU6-386P-201ENST00000362650 107 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 RNA5SP77-201ENST00000365394 120 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 RAB5CP1-201ENST00000395972 580 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 RNU2-22P-201ENST00000411266 212 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 AC007562.1-201ENST00000421819 517 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 MTND5P23-201ENST00000430812 1655 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 RPEP4-201ENST00000437636 602 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 SNRPFP2-201ENST00000440710 251 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 OR13K1P-201ENST00000444577 975 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 AC023274.2-201ENST00000445264 521 ntBASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NHLRC1Q6VVB1 C1DP3-201ENST00000455013 423 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms