Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 OR5T3-201ENST00000303059 1023 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 RNU6-386P-201ENST00000362650 107 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 RNA5SP279-201ENST00000365513 117 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC234781.4-201ENST00000419384 244 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 CYCSP52-201ENST00000422857 310 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AHCYP8-201ENST00000425108 209 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC239367.3-201ENST00000428996 814 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC007679.3-201ENST00000434035 414 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 MEF2AP1-201ENST00000454867 863 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 Z83838.1-202ENST00000456225 839 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 SEPT7P6-201ENST00000469999 1143 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 RPL23AP68-201ENST00000480924 445 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 OR52A4P-202ENST00000481634 799 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 ASNSP4-201ENST00000511103 447 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 MIR378C-201ENST00000578683 81 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 CTSLP2-201ENST00000580501 394 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 BNIP3P32-201ENST00000600015 554 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AL713998.2-201ENST00000604538 1198 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC012467.1-201ENST00000607740 256 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC004241.2-201ENST00000614562 444 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 TCL6_3.1-201ENST00000619064 137 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC073869.7-201ENST00000640874 297 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC005332.9-201ENST00000620266 2921 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 API5P1-201ENST00000424316 1510 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC010624.4-201ENST00000597606 1351 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AL353763.1-201ENST00000624467 1628 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 AL121839.2-201ENST00000565058 6943 ntBASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
PDLIM3Q53GG5 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 TMCC1P1-201ENST00000518897 1980 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AP002512.4-202ENST00000641599 4530 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 OR11H13P-201ENST00000359695 979 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 SNORA70H-201ENST00000383910 135 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 SNORA70J-201ENST00000384182 135 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC019178.1-201ENST00000392337 440 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AP003170.5-201ENST00000397185 335 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 GCNT1P4-201ENST00000404096 329 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 FAM204CP-201ENST00000424489 642 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AL139415.1-201ENST00000424862 352 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC007365.2-201ENST00000428806 458 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC018804.1-201ENST00000430381 618 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 RSL24D1P8-201ENST00000434442 492 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 DNAJA1P5-201ENST00000440278 943 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 BTBD7P2-201ENST00000441962 620 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC016908.1-201ENST00000442571 1219 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC073072.2-201ENST00000447425 348 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 SBDSP1-204ENST00000453858 737 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 RN7SL174P-201ENST00000475578 289 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms