Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.05□□□□□ -1.6
LMO4P61968 AL445466.1-201ENST00000448432 357 ntBASIC5.05□□□□□ -1.6
LMO4P61968 RPL31P15-201ENST00000449770 338 ntBASIC5.05□□□□□ -1.6
LMO4P61968 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.05□□□□□ -1.6
LMO4P61968 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.05□□□□□ -1.6
LMO4P61968 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.05□□□□□ -1.6
LMO4P61968 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.05□□□□□ -1.6
LMO4P61968 AC114781.3-201ENST00000512083 142 ntBASIC5.05□□□□□ -1.6
LMO4P61968 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.05□□□□□ -1.6
LMO4P61968 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.05□□□□□ -1.6
LMO4P61968 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 AP004607.6-201ENST00000525033 1202 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.05□□□□□ -1.6
LMO4P61968 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.05□□□□□ -1.6
LMO4P61968 AP005901.4-201ENST00000577336 569 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AC018690.1-201ENST00000608144 626 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AC103703.1-201ENST00000634783 663 ntBASIC5.05□□□□□ -1.6
LMO4P61968 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AC105749.1-201ENST00000631338 2008 ntBASIC5.05□□□□□ -1.6
LMO4P61968 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.05□□□□□ -1.6
LMO4P61968 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 AL359091.1-201ENST00000449048 1734 ntBASIC5.05□□□□□ -1.6
LMO4P61968 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 GNL2P1-201ENST00000451274 2190 ntBASIC5.05□□□□□ -1.6
LMO4P61968 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LMO4P61968 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.05□□□□□ -1.6
LMO4P61968 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.05□□□□□ -1.6
LMO4P61968 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 AC022819.1-201ENST00000563495 3910 ntBASIC5.04□□□□□ -1.6
LMO4P61968 HDAC1P2-201ENST00000453661 1398 ntBASIC5.04□□□□□ -1.6
LMO4P61968 MIPEPP2-201ENST00000422560 1819 ntBASIC5.04□□□□□ -1.6
LMO4P61968 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.04□□□□□ -1.6
LMO4P61968 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.04□□□□□ -1.6
LMO4P61968 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.04□□□□□ -1.6
LMO4P61968 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 OR52B3P-201ENST00000314715 928 ntBASIC5.04□□□□□ -1.6
LMO4P61968 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 RNA5SP375-201ENST00000362975 119 ntBASIC5.04□□□□□ -1.6
LMO4P61968 RN7SKP81-201ENST00000365603 331 ntBASIC5.04□□□□□ -1.6
LMO4P61968 RNA5SP284-201ENST00000384547 118 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AL512422.1-201ENST00000407033 553 ntBASIC5.04□□□□□ -1.6
LMO4P61968 RN7SKP206-201ENST00000410823 293 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.04□□□□□ -1.6
LMO4P61968 RPS15AP30-201ENST00000420976 390 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 OR6C71P-201ENST00000432580 913 ntBASIC5.04□□□□□ -1.6
LMO4P61968 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 SDR42E1P3-201ENST00000438345 502 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.04□□□□□ -1.6
LMO4P61968 AL391987.1-201ENST00000441025 200 ntBASIC5.04□□□□□ -1.6
LMO4P61968 OR13K1P-201ENST00000444577 975 ntBASIC5.04□□□□□ -1.6
LMO4P61968 RSL24D1P2-201ENST00000445584 366 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.04□□□□□ -1.6
LMO4P61968 AC073594.1-201ENST00000462065 364 ntBASIC5.04□□□□□ -1.6
LMO4P61968 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 AC112184.1-201ENST00000505179 312 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.04□□□□□ -1.6
LMO4P61968 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.04□□□□□ -1.6
LMO4P61968 SETP21-201ENST00000514799 892 ntBASIC5.04□□□□□ -1.6
LMO4P61968 WBP1LP3-201ENST00000523033 208 ntBASIC5.04□□□□□ -1.6
LMO4P61968 KCTD9P4-201ENST00000526766 1166 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AP000648.1-201ENST00000529682 397 ntBASIC5.04□□□□□ -1.6
LMO4P61968 OR6M2P-201ENST00000529831 871 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AP003168.1-201ENST00000530091 307 ntBASIC5.04□□□□□ -1.6
LMO4P61968 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 AC092121.1-201ENST00000569452 202 ntBASIC5.04□□□□□ -1.6
LMO4P61968 RNU4ATAC-201ENST00000580972 127 ntBASIC5.04□□□□□ -1.6
LMO4P61968 PLEKHA3P1-201ENST00000598554 894 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AL031601.1-201ENST00000605702 394 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AL023583.1-201ENST00000607518 1143 ntBASIC5.04□□□□□ -1.6
LMO4P61968 AL136131.3-201ENST00000607600 188 ntBASIC5.04□□□□□ -1.6
LMO4P61968 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.04□□□□□ -1.6
LMO4P61968 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 MIR4302-201ENST00000638058 60 ntBASIC5.04□□□□□ -1.6
LMO4P61968 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
LMO4P61968 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.04□□□□□ -1.6
LMO4P61968 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.04□□□□□ -1.6
LMO4P61968 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.04□□□□□ -1.6
LMO4P61968 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms