Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NPM1P23-201ENST00000440193 849 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AL158053.1-201ENST00000441503 453 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 SNRPBP1-201ENST00000443634 282 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A1P61619 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A1P61619 CR383656.1-201ENST00000484916 377 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC021146.10-201ENST00000515628 706 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC116917.1-201ENST00000520558 305 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC023310.2-201ENST00000553844 547 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AL445383.1-201ENST00000554689 874 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AC091304.4-201ENST00000565703 620 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC011921.2-201ENST00000589465 152 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 BNIP3P27-201ENST00000599991 412 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AL162233.1-201ENST00000620014 944 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AL356490.1-201ENST00000623079 479 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AL035425.4-201ENST00000624509 1063 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AC068213.1-201ENST00000625124 226 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A1P61619 CASC19-228ENST00000641414 1684 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC087516.1-201ENST00000561236 2428 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SEC61A1P61619 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SEC61A1P61619 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
SEC61A1P61619 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A1P61619 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A1P61619 NLRP3P1-201ENST00000622303 1785 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SEC61A1P61619 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SEC61A1P61619 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A1P61619 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC005725.1-201ENST00000577346 2607 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 AL731532.1-201ENST00000623972 4236 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SEC61A1P61619 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 RNA5SP321-201ENST00000362722 111 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 SNORA38B-201ENST00000363524 131 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 RNA5SP85-201ENST00000365378 119 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 GNG5P2-201ENST00000372054 207 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 RNU6-883P-201ENST00000384597 107 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AL607077.1-201ENST00000401718 499 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 AL023284.3-201ENST00000407767 334 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 AL357078.2-201ENST00000416486 427 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A1P61619 RPS7P12-201ENST00000422385 582 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 KIF4CP-201ENST00000422742 1279 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 RPS15AP29-201ENST00000445539 400 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 OR6C72P-201ENST00000451403 892 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 RPL26P30-201ENST00000453533 435 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 RN7SL393P-201ENST00000463588 296 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 AC005165.2-201ENST00000466070 380 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 OR51A1P-201ENST00000511110 946 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A1P61619 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SEC61A1P61619 MTND2P17-201ENST00000550281 688 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A1P61619 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 MIR3157-201ENST00000578688 85 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.57□□□□□ -1.52
SEC61A1P61619 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AL713998.2-201ENST00000604538 1198 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 SNORD96A-201ENST00000606577 79 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC093388.1-201ENST00000609166 430 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A1P61619 MIR6780B-201ENST00000610307 79 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms