Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CKS1BP61024 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CKS1BP61024 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CKS1BP61024 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 THAP12P5-201ENST00000405864 2275 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 LINC01616-201ENST00000561816 2280 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 SAGE3P-201ENST00000619800 1635 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 AL353763.1-201ENST00000624467 1628 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CKS1BP61024 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CKS1BP61024 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CKS1BP61024 AL136100.1-201ENST00000407696 330 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CKS1BP61024 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.33□□□□□ -1.72
CKS1BP61024 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 RN7SKP161-201ENST00000411110 305 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 UBE2V1P14-201ENST00000415815 558 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 RANP7-201ENST00000418085 644 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS1BP61024 ATP5LP4-201ENST00000434169 307 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 AC079922.1-201ENST00000443291 359 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 GAPDHP20-201ENST00000444107 1007 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.33□□□□□ -1.72
CKS1BP61024 RPL7L1P3-201ENST00000455249 689 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 AC131392.1-201ENST00000506490 633 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 Z99943.2-201ENST00000507585 266 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 AC097460.2-201ENST00000511857 741 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 IGKV1D-22-201ENST00000518953 324 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 TBCA-209ENST00000522370 435 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS1BP61024 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS1BP61024 AP001000.1-201ENST00000526843 742 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.33□□□□□ -1.72
CKS1BP61024 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 AC090022.1-201ENST00000546569 311 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 NF1P12-201ENST00000549593 583 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS1BP61024 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS1BP61024 STARD6-204ENST00000584040 660 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS1BP61024 MIR3936-201ENST00000584304 110 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 AC024085.1-201ENST00000604299 432 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS1BP61024 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 AC004076.2-201ENST00000620532 3323 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CKS1BP61024 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS1BP61024 HSPA8P18-201ENST00000439846 1928 ntBASIC4.33□□□□□ -1.72
CKS1BP61024 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CKS1BP61024 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CKS1BP61024 LINC01808-203ENST00000641932 1643 ntBASIC4.32□□□□□ -1.72
CKS1BP61024 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CKS1BP61024 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CKS1BP61024 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS1BP61024 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CKS1BP61024 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CKS1BP61024 SMG1P5-202ENST00000529428 4219 ntBASIC4.32□□□□□ -1.72
CKS1BP61024 SMG1P2-201ENST00000566127 4221 ntBASIC4.32□□□□□ -1.72
CKS1BP61024 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CKS1BP61024 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CKS1BP61024 NOX1-203ENST00000372964 661 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS1BP61024 MIR188-201ENST00000385034 86 ntBASIC4.32□□□□□ -1.72
CKS1BP61024 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms