Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 RN7SKP185-201ENST00000362813 326 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 RN7SKP69-201ENST00000365390 305 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXA3P55318 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXA3P55318 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXA3P55318 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXA3P55318 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXA3P55318 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXA3P55318 MED28P3-201ENST00000444288 531 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXA3P55318 RN7SL91P-201ENST00000469313 291 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 RN7SL868P-201ENST00000485915 303 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 RPL5P3-201ENST00000493817 889 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXA3P55318 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXA3P55318 SNX18P24-201ENST00000505249 671 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 GOLGA5P1-201ENST00000507317 980 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXA3P55318 AC020937.1-201ENST00000519677 1013 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXA3P55318 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXA3P55318 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXA3P55318 RPL3P13-201ENST00000550415 216 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXA3P55318 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXA3P55318 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXA3P55318 AC010487.1-201ENST00000594408 1172 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 EXOSC3P2-201ENST00000594464 497 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 OR9K1P-202ENST00000641111 3217 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXA3P55318 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXA3P55318 SMG1P5-202ENST00000529428 4219 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 SMG1P2-201ENST00000566127 4221 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 MAPK10-338ENST00000641647 3362 ntBASIC4.48□□□□□ -1.69
FOXA3P55318 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXA3P55318 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXA3P55318 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
FOXA3P55318 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
FOXA3P55318 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
FOXA3P55318 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXA3P55318 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXA3P55318 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXA3P55318 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
FOXA3P55318 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXA3P55318 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXA3P55318 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXA3P55318 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXA3P55318 AC011416.1-201ENST00000514947 1732 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXA3P55318 RNU1-49P-201ENST00000363468 159 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
FOXA3P55318 RNA5SP187-201ENST00000384400 119 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXA3P55318 RPL18AP14-201ENST00000417685 526 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXA3P55318 AC009303.1-201ENST00000426307 352 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AC009362.1-201ENST00000427253 406 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXA3P55318 PPIAP10-201ENST00000438675 458 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 RPS23P9-201ENST00000448848 438 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXA3P55318 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXA3P55318 AC025271.1-201ENST00000485045 429 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXA3P55318 RPL7L1P7-201ENST00000509986 724 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.47□□□□□ -1.69
FOXA3P55318 KHDC1P1-201ENST00000511053 508 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXA3P55318 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXA3P55318 SNORA70.11-201ENST00000515987 138 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 SNORA70.13-201ENST00000516116 138 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AL133399.1-201ENST00000527476 298 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.47□□□□□ -1.69
FOXA3P55318 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXA3P55318 AP001858.2-201ENST00000536213 601 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.47□□□□□ -1.69
FOXA3P55318 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXA3P55318 AC133552.4-201ENST00000576103 676 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AP006587.6-201ENST00000582128 1091 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXA3P55318 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXA3P55318 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.47□□□□□ -1.69
FOXA3P55318 AC010503.3-201ENST00000594355 540 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AL035417.2-201ENST00000603887 796 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 AC007786.3-201ENST00000615154 596 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
FOXA3P55318 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXA3P55318 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
FOXA3P55318 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXA3P55318 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXA3P55318 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
FOXA3P55318 AC006484.1-201ENST00000435086 1884 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXA3P55318 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXA3P55318 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXA3P55318 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXA3P55318 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXA3P55318 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms