Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.73□□□□□ -1.33
VCPP55072 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 SNORA70H-201ENST00000383910 135 ntBASIC6.73□□□□□ -1.33
VCPP55072 SNORA70J-201ENST00000384182 135 ntBASIC6.73□□□□□ -1.33
VCPP55072 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VCPP55072 RPL21P50-201ENST00000417698 477 ntBASIC6.73□□□□□ -1.33
VCPP55072 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.73□□□□□ -1.33
VCPP55072 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.73□□□□□ -1.33
VCPP55072 AC009237.1-201ENST00000442127 744 ntBASIC6.73□□□□□ -1.33
VCPP55072 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.73□□□□□ -1.33
VCPP55072 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.73□□□□□ -1.33
VCPP55072 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 AC023141.9-201ENST00000458734 412 ntBASIC6.73□□□□□ -1.33
VCPP55072 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.73□□□□□ -1.33
VCPP55072 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.73□□□□□ -1.33
VCPP55072 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.73□□□□□ -1.33
VCPP55072 RPL12P30-201ENST00000488389 499 ntBASIC6.73□□□□□ -1.33
VCPP55072 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.73□□□□□ -1.33
VCPP55072 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.73□□□□□ -1.33
VCPP55072 AC068305.2-201ENST00000550567 1205 ntBASIC6.73□□□□□ -1.33
VCPP55072 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 AL121579.2-201ENST00000555466 590 ntBASIC6.73□□□□□ -1.33
VCPP55072 AC007225.2-201ENST00000562529 256 ntBASIC6.73□□□□□ -1.33
VCPP55072 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.73□□□□□ -1.33
VCPP55072 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.73□□□□□ -1.33
VCPP55072 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 AC011455.2-201ENST00000599320 3336 ntBASIC6.73□□□□□ -1.33
VCPP55072 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.73□□□□□ -1.33
VCPP55072 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.73□□□□□ -1.33
VCPP55072 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.73□□□□□ -1.33
VCPP55072 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 XKRY2-202ENST00000623874 1581 ntBASIC6.73□□□□□ -1.33
VCPP55072 XKRY-202ENST00000624960 1581 ntBASIC6.73□□□□□ -1.33
VCPP55072 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 AC137056.2-201ENST00000624055 1958 ntBASIC6.73□□□□□ -1.33
VCPP55072 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VCPP55072 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 HSPD1P9-201ENST00000420325 1636 ntBASIC6.72□□□□□ -1.33
VCPP55072 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.72□□□□□ -1.33
VCPP55072 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.72□□□□□ -1.33
VCPP55072 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
VCPP55072 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
VCPP55072 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
VCPP55072 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 AL451142.1-201ENST00000375867 775 ntBASIC6.72□□□□□ -1.33
VCPP55072 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.72□□□□□ -1.33
VCPP55072 RPL23AP85-201ENST00000421838 433 ntBASIC6.72□□□□□ -1.33
VCPP55072 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
VCPP55072 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.72□□□□□ -1.33
VCPP55072 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.72□□□□□ -1.33
VCPP55072 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.72□□□□□ -1.33
VCPP55072 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.72□□□□□ -1.33
VCPP55072 RN7SL165P-201ENST00000477476 291 ntBASIC6.72□□□□□ -1.33
VCPP55072 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 AC091965.3-201ENST00000506236 208 ntBASIC6.72□□□□□ -1.33
VCPP55072 RNA5SP271-201ENST00000516700 88 ntBASIC6.72□□□□□ -1.33
VCPP55072 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.72□□□□□ -1.33
VCPP55072 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.72□□□□□ -1.33
VCPP55072 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.72□□□□□ -1.33
VCPP55072 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.72□□□□□ -1.33
VCPP55072 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.72□□□□□ -1.33
VCPP55072 SNORD95-201ENST00000579879 68 ntBASIC6.72□□□□□ -1.33
VCPP55072 AC233702.7-202ENST00000582941 211 ntBASIC6.72□□□□□ -1.33
VCPP55072 MIR4701-201ENST00000583094 63 ntBASIC6.72□□□□□ -1.33
VCPP55072 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.72□□□□□ -1.33
VCPP55072 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.72□□□□□ -1.33
VCPP55072 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.72□□□□□ -1.33
VCPP55072 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.72□□□□□ -1.33
VCPP55072 AC129778.1-202ENST00000623812 261 ntBASIC6.72□□□□□ -1.33
VCPP55072 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.72□□□□□ -1.33
VCPP55072 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.72□□□□□ -1.33
VCPP55072 AL591379.1-207ENST00000635982 261 ntBASIC6.72□□□□□ -1.33
VCPP55072 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.72□□□□□ -1.33
VCPP55072 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.72□□□□□ -1.33
VCPP55072 AL049634.1-201ENST00000453770 1720 ntBASIC6.72□□□□□ -1.33
VCPP55072 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
VCPP55072 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.72□□□□□ -1.33
VCPP55072 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 BX284613.1-201ENST00000452221 1641 ntBASIC6.72□□□□□ -1.33
VCPP55072 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VCPP55072 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms