Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RPS18P1-201ENST00000447840 458 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CR1P49238 HIGD1AP16-201ENST00000450986 258 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CR1P49238 CYP4F27P-201ENST00000514557 494 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 AC113191.1-201ENST00000517759 403 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 AC008429.4-201ENST00000521201 182 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.37□□□□□ -1.55
CX3CR1P49238 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.37□□□□□ -1.55
CX3CR1P49238 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC063977.7-201ENST00000594454 337 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC022001.1-201ENST00000605193 268 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC069234.4-201ENST00000621276 412 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 AL122023.1-201ENST00000622847 530 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC015799.1-201ENST00000622996 3122 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CR1P49238 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.37□□□□□ -1.55
CX3CR1P49238 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC022164.1-201ENST00000568767 2673 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CX3CR1P49238 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CR1P49238 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CR1P49238 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.36□□□□□ -1.55
CX3CR1P49238 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 AL096800.1-201ENST00000405326 893 ntBASIC5.36□□□□□ -1.55
CX3CR1P49238 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CR1P49238 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC094019.1-201ENST00000434678 472 ntBASIC5.36□□□□□ -1.55
CX3CR1P49238 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CR1P49238 RARRES2P3-201ENST00000457739 473 ntBASIC5.36□□□□□ -1.55
CX3CR1P49238 AC117500.1-201ENST00000497352 755 ntBASIC5.36□□□□□ -1.55
CX3CR1P49238 RN7SL104P-201ENST00000498686 293 ntBASIC5.36□□□□□ -1.55
CX3CR1P49238 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.36□□□□□ -1.55
CX3CR1P49238 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CX3CR1P49238 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC008555.7-201ENST00000605008 583 ntBASIC5.36□□□□□ -1.55
CX3CR1P49238 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.36□□□□□ -1.55
CX3CR1P49238 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CR1P49238 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC114876.1-201ENST00000490962 1366 ntBASIC5.36□□□□□ -1.55
CX3CR1P49238 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CX3CR1P49238 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CR1P49238 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CR1P49238 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 AC092070.2-203ENST00000598377 3644 ntBASIC5.36□□□□□ -1.55
CX3CR1P49238 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CR1P49238 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CX3CR1P49238 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.35□□□□□ -1.55
CX3CR1P49238 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms