Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDX1P47902 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDX1P47902 RNU11-6P-201ENST00000391127 133 ntBASIC5.25□□□□□ -1.57
CDX1P47902 RPL9P21-201ENST00000392269 505 ntBASIC5.25□□□□□ -1.57
CDX1P47902 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 AL589655.1-201ENST00000405398 482 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC096537.2-201ENST00000413707 714 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 AC013470.3-201ENST00000420252 1194 ntBASIC5.25□□□□□ -1.57
CDX1P47902 PTP4A1P1-201ENST00000420539 515 ntBASIC5.25□□□□□ -1.57
CDX1P47902 REREP1Y-201ENST00000422655 198 ntBASIC5.25□□□□□ -1.57
CDX1P47902 FAM204CP-201ENST00000424489 642 ntBASIC5.25□□□□□ -1.57
CDX1P47902 GAPDHP19-201ENST00000431768 1005 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AL590128.1-201ENST00000433407 286 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC013403.1-201ENST00000436954 263 ntBASIC5.25□□□□□ -1.57
CDX1P47902 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 REREP2Y-201ENST00000439103 200 ntBASIC5.25□□□□□ -1.57
CDX1P47902 ARL5AP3-201ENST00000439327 386 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC083855.1-201ENST00000440041 258 ntBASIC5.25□□□□□ -1.57
CDX1P47902 NPM1P23-201ENST00000440193 849 ntBASIC5.25□□□□□ -1.57
CDX1P47902 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.25□□□□□ -1.57
CDX1P47902 AKR1D1P1-201ENST00000457236 936 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.25□□□□□ -1.57
CDX1P47902 RPS3AP49-201ENST00000472161 790 ntBASIC5.25□□□□□ -1.57
CDX1P47902 OR52A4P-202ENST00000481634 799 ntBASIC5.25□□□□□ -1.57
CDX1P47902 RPL7AP23-201ENST00000482625 776 ntBASIC5.25□□□□□ -1.57
CDX1P47902 RPL9P15-201ENST00000491096 532 ntBASIC5.25□□□□□ -1.57
CDX1P47902 RN7SL143P-201ENST00000496780 297 ntBASIC5.25□□□□□ -1.57
CDX1P47902 NACAP5-201ENST00000509863 636 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC091849.1-201ENST00000509920 121 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 AP002981.1-201ENST00000517692 975 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC122713.1-201ENST00000518368 1015 ntBASIC5.25□□□□□ -1.57
CDX1P47902 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.25□□□□□ -1.57
CDX1P47902 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.25□□□□□ -1.57
CDX1P47902 AP005639.1-201ENST00000526939 192 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.25□□□□□ -1.57
CDX1P47902 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.25□□□□□ -1.57
CDX1P47902 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.25□□□□□ -1.57
CDX1P47902 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.25□□□□□ -1.57
CDX1P47902 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.25□□□□□ -1.57
CDX1P47902 ANP32BP1-202ENST00000568553 737 ntBASIC5.25□□□□□ -1.57
CDX1P47902 RN7SL270P-201ENST00000579643 281 ntBASIC5.25□□□□□ -1.57
CDX1P47902 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.25□□□□□ -1.57
CDX1P47902 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 AL078623.1-201ENST00000602702 907 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AL021368.1-201ENST00000607490 540 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AL592494.3-201ENST00000609485 464 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 MIR6885-201ENST00000612241 66 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AL133370.2-201ENST00000619934 439 ntBASIC5.25□□□□□ -1.57
CDX1P47902 MIR6503-201ENST00000622884 86 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC006328.2-201ENST00000623198 397 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC012005.2-201ENST00000624333 397 ntBASIC5.25□□□□□ -1.57
CDX1P47902 SNORA16A-202ENST00000628458 135 ntBASIC5.25□□□□□ -1.57
CDX1P47902 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 AC027559.1-201ENST00000636288 271 ntBASIC5.25□□□□□ -1.57
CDX1P47902 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 AC027279.1-201ENST00000568885 4284 ntBASIC5.25□□□□□ -1.57
CDX1P47902 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
CDX1P47902 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.25□□□□□ -1.57
CDX1P47902 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC010132.4-201ENST00000569883 1368 ntBASIC5.25□□□□□ -1.57
CDX1P47902 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CDX1P47902 AC010266.2-201ENST00000564741 3255 ntBASIC5.25□□□□□ -1.57
CDX1P47902 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 AL355488.2-201ENST00000609909 2850 ntBASIC5.25□□□□□ -1.57
CDX1P47902 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 CDC27P2-201ENST00000425026 1922 ntBASIC5.25□□□□□ -1.57
CDX1P47902 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDX1P47902 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.24□□□□□ -1.57
CDX1P47902 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDX1P47902 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDX1P47902 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.24□□□□□ -1.57
CDX1P47902 RBPJP6-201ENST00000411556 1431 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms