Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC006600.2-201ENST00000624834 2506 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
APOBEC1P41238 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
APOBEC1P41238 RPL11P4-201ENST00000332269 436 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 OR11H13P-201ENST00000359695 979 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 SNORA40.4-201ENST00000390971 128 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
APOBEC1P41238 RN7SKP121-201ENST00000410842 305 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 RNA5SP115-201ENST00000411160 107 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 RNU2-72P-201ENST00000411175 163 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.67□□□□□ -1.5
APOBEC1P41238 CR848007.2-201ENST00000424918 787 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 IGLV3-4-201ENST00000432300 244 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 AL645936.1-201ENST00000441979 518 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 CXCR2P1-202ENST00000443392 1074 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.67□□□□□ -1.5
APOBEC1P41238 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.67□□□□□ -1.5
APOBEC1P41238 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.67□□□□□ -1.5
APOBEC1P41238 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.67□□□□□ -1.5
APOBEC1P41238 RNU6-467P-201ENST00000517027 110 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.67□□□□□ -1.5
APOBEC1P41238 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.67□□□□□ -1.5
APOBEC1P41238 OR8K2P-201ENST00000524645 927 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.67□□□□□ -1.5
APOBEC1P41238 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
APOBEC1P41238 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.67□□□□□ -1.5
APOBEC1P41238 RN7SL230P-201ENST00000580835 303 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.67□□□□□ -1.5
APOBEC1P41238 AC092474.3-201ENST00000603022 568 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 AC005972.3-201ENST00000606304 481 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 AL021368.3-201ENST00000607119 578 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.67□□□□□ -1.5
APOBEC1P41238 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 AC009032.1-201ENST00000617574 431 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 MIR6823-201ENST00000622118 61 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.67□□□□□ -1.5
APOBEC1P41238 TMCC1P1-201ENST00000518897 1980 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 CCNT2P1-201ENST00000423082 1315 ntBASIC5.67□□□□□ -1.5
APOBEC1P41238 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOBEC1P41238 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.66□□□□□ -1.5
APOBEC1P41238 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 CUL4AP1-201ENST00000514750 1863 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.66□□□□□ -1.5
APOBEC1P41238 ABCA11P-202ENST00000504019 2110 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.66□□□□□ -1.5
APOBEC1P41238 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 RN7SKP237-201ENST00000364663 301 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 LCN1P2-201ENST00000372030 223 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 AL157702.1-201ENST00000398764 426 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AL512504.1-201ENST00000415494 778 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.66□□□□□ -1.5
APOBEC1P41238 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.66□□□□□ -1.5
APOBEC1P41238 AC094019.1-201ENST00000434678 472 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 LINC00328-2P-201ENST00000436585 219 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 PPIAP10-201ENST00000438675 458 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.66□□□□□ -1.5
APOBEC1P41238 MTCO3P43-201ENST00000440974 771 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AC016908.1-201ENST00000442571 1219 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AC079922.1-201ENST00000443291 359 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
APOBEC1P41238 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 RPL7L1P3-201ENST00000455249 689 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 H3F3AP5-201ENST00000475267 429 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.66□□□□□ -1.5
APOBEC1P41238 AC135999.1-201ENST00000478962 479 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 RPS27P20-201ENST00000492051 246 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 RNU6-1334P-201ENST00000516032 105 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.66□□□□□ -1.5
APOBEC1P41238 BTG1P1-201ENST00000540396 508 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.66□□□□□ -1.5
APOBEC1P41238 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.66□□□□□ -1.5
APOBEC1P41238 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.66□□□□□ -1.5
APOBEC1P41238 OR4H6P-201ENST00000563771 921 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AC005632.2-201ENST00000564271 828 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms