Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC135983.3-201ENST00000528049 1226 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.11□□□□□ -1.43
HNF4AP41235 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.11□□□□□ -1.43
HNF4AP41235 TDGP1-201ENST00000543961 1229 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.11□□□□□ -1.43
HNF4AP41235 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.11□□□□□ -1.43
HNF4AP41235 AL121839.1-201ENST00000556233 1185 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.11□□□□□ -1.43
HNF4AP41235 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.11□□□□□ -1.43
HNF4AP41235 ARGFXP2-201ENST00000579304 949 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.11□□□□□ -1.43
HNF4AP41235 AP002884.5-201ENST00000595053 1132 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 MIR7159-201ENST00000620587 66 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.11□□□□□ -1.43
HNF4AP41235 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.11□□□□□ -1.43
HNF4AP41235 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
HNF4AP41235 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HNF4AP41235 GUCY1B2-204ENST00000531898 1979 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 AL136984.1-201ENST00000607611 1893 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HNF4AP41235 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HNF4AP41235 AC092692.1-201ENST00000623625 2595 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
HNF4AP41235 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.1□□□□□ -1.43
HNF4AP41235 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.1□□□□□ -1.43
HNF4AP41235 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HNF4AP41235 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 SHQ1P1-201ENST00000437111 1544 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 SSXP3-201ENST00000442971 1300 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 RNA5SP77-201ENST00000365394 120 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 AL451046.1-201ENST00000406097 534 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.1□□□□□ -1.43
HNF4AP41235 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.1□□□□□ -1.43
HNF4AP41235 REREP1Y-201ENST00000422655 198 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.1□□□□□ -1.43
HNF4AP41235 BX119904.3-201ENST00000428194 957 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.1□□□□□ -1.43
HNF4AP41235 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.1□□□□□ -1.43
HNF4AP41235 REREP2Y-201ENST00000439103 200 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 ARAFP2-201ENST00000440565 559 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 AC073476.1-201ENST00000452854 407 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 MTCYBP14-201ENST00000457471 715 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 RPS7P10-201ENST00000464254 603 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 RN7SL221P-201ENST00000466190 281 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.1□□□□□ -1.43
HNF4AP41235 ASNSP4-201ENST00000511103 447 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 RNA5SP400-201ENST00000517155 111 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 NPM1P52-201ENST00000518264 846 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.1□□□□□ -1.43
HNF4AP41235 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.1□□□□□ -1.43
HNF4AP41235 AC124891.1-201ENST00000536322 519 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.1□□□□□ -1.43
HNF4AP41235 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.1□□□□□ -1.43
HNF4AP41235 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.1□□□□□ -1.43
HNF4AP41235 MIR3157-201ENST00000578688 85 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 WBP1LP11-201ENST00000586141 328 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 AC026898.1-201ENST00000586404 571 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 NDUFB9P1-201ENST00000604683 510 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 LSM1P2-201ENST00000604911 322 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.1□□□□□ -1.43
HNF4AP41235 AC067838.1-201ENST00000606064 577 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.1□□□□□ -1.43
HNF4AP41235 AC015819.1-201ENST00000613588 663 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 AC025262.3-201ENST00000623666 360 ntBASIC6.1□□□□□ -1.43
HNF4AP41235 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HNF4AP41235 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.1□□□□□ -1.43
HNF4AP41235 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HNF4AP41235 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HNF4AP41235 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HNF4AP41235 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.09□□□□□ -1.43
HNF4AP41235 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms