Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.43
HMGCLP35914 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.09□□□□□ -1.43
HMGCLP35914 AC009237.12-201ENST00000604755 742 ntBASIC6.09□□□□□ -1.43
HMGCLP35914 AL645933.2-201ENST00000606743 1207 ntBASIC6.09□□□□□ -1.43
HMGCLP35914 AL512652.1-201ENST00000619006 500 ntBASIC6.09□□□□□ -1.43
HMGCLP35914 AP001052.1-201ENST00000626421 99 ntBASIC6.09□□□□□ -1.43
HMGCLP35914 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCLP35914 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCLP35914 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCLP35914 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCLP35914 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HMGCLP35914 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.09□□□□□ -1.44
HMGCLP35914 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
HMGCLP35914 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.09□□□□□ -1.44
HMGCLP35914 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HMGCLP35914 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCLP35914 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HMGCLP35914 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HMGCLP35914 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
HMGCLP35914 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HMGCLP35914 RBMY1HP-201ENST00000382759 1389 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCLP35914 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCLP35914 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCLP35914 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCLP35914 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.08□□□□□ -1.44
HMGCLP35914 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCLP35914 AL022323.4-201ENST00000623980 13120 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HMGCLP35914 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HMGCLP35914 RNA5SP375-201ENST00000362975 119 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC245096.1-201ENST00000413104 546 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 SETP9-201ENST00000423837 832 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGCLP35914 PNKDP1-201ENST00000435914 430 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC023141.3-201ENST00000436698 278 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCLP35914 ZNF619P1-201ENST00000446539 752 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 FTLP8-201ENST00000446770 267 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC009963.3-201ENST00000458090 486 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 RPL23AP40-201ENST00000487630 390 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AL035690.1-201ENST00000490892 383 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC008945.1-201ENST00000505144 499 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCLP35914 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCLP35914 PRMT5P1-201ENST00000514351 598 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 TPM3P3-201ENST00000521343 354 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.08□□□□□ -1.44
HMGCLP35914 AC024405.1-201ENST00000532521 1042 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCLP35914 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGCLP35914 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGCLP35914 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCLP35914 AC007346.1-201ENST00000569208 867 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 MIR4420-201ENST00000583944 77 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGCLP35914 AC119403.2-201ENST00000590960 598 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCLP35914 AC004890.3-201ENST00000605566 1095 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC092681.3-201ENST00000609463 678 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 MIR7109-201ENST00000613748 65 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC005225.5-201ENST00000623547 2225 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HMGCLP35914 AC140479.2-201ENST00000421567 3130 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 AC119674.1-202ENST00000641333 1860 ntBASIC6.08□□□□□ -1.44
HMGCLP35914 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCLP35914 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
HMGCLP35914 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCLP35914 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
HMGCLP35914 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HMGCLP35914 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCLP35914 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGCLP35914 AL121768.1-201ENST00000613917 2544 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HMGCLP35914 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCLP35914 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCLP35914 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 AC016583.1-201ENST00000624221 2431 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCLP35914 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCLP35914 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCLP35914 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCLP35914 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCLP35914 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCLP35914 RNU1-65P-201ENST00000363919 148 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGCLP35914 AL451046.1-201ENST00000406097 534 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 RN7SKP166-201ENST00000410812 305 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGCLP35914 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGCLP35914 AL353662.1-201ENST00000439099 327 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 RBMY2AP-201ENST00000445405 1157 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 RBMY2CP-201ENST00000448575 1157 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 RBMY2DP-202ENST00000448881 1157 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 AC016027.4-201ENST00000450866 277 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 RBMY2BP-202ENST00000451071 1156 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 CTSLP6-201ENST00000458273 1002 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms