Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC12P31275 TECRP2-201ENST00000503270 928 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 NPY6R-201ENST00000503807 1112 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AC233724.10-201ENST00000510454 409 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 DKK2-202ENST00000510463 908 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC12P31275 MTCYBP37-201ENST00000510642 1133 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC12P31275 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.59□□□□□ -1.35
HOXC12P31275 OR4C1P-201ENST00000530880 937 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC12P31275 ELOCP32-201ENST00000548625 324 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC12P31275 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.59□□□□□ -1.35
HOXC12P31275 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC12P31275 RBM22P12-201ENST00000567098 1255 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC12P31275 AC016629.2-201ENST00000597341 199 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AC005479.3-201ENST00000602790 431 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AL392112.1-201ENST00000605115 829 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 OR2BH1P-201ENST00000608850 864 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AC019131.2-201ENST00000609071 870 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AL022238.3-201ENST00000609279 443 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.59□□□□□ -1.35
HOXC12P31275 HTR1DP1-201ENST00000616500 888 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AL138693.1-201ENST00000622219 129 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AL132796.3-201ENST00000624703 900 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AP000550.3-201ENST00000637734 379 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 LINC01808-202ENST00000641680 1116 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC12P31275 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 AC110998.1-201ENST00000519029 2053 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
HOXC12P31275 SF3A3P1-201ENST00000446317 1477 ntBASIC6.59□□□□□ -1.36
HOXC12P31275 AC006042.3-201ENST00000454684 1469 ntBASIC6.59□□□□□ -1.36
HOXC12P31275 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC6.59□□□□□ -1.36
HOXC12P31275 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.59□□□□□ -1.36
HOXC12P31275 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.59□□□□□ -1.36
HOXC12P31275 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HOXC12P31275 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.59□□□□□ -1.36
HOXC12P31275 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HOXC12P31275 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.59□□□□□ -1.36
HOXC12P31275 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.59□□□□□ -1.36
HOXC12P31275 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HOXC12P31275 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 AC112255.1-201ENST00000624070 2493 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC12P31275 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 OR10D1P-201ENST00000355343 936 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 RNU6-353P-201ENST00000364266 108 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AC099535.1-201ENST00000408928 371 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC024937.2-201ENST00000411669 1242 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 GSTA10P-201ENST00000412182 576 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 CBX1P3-201ENST00000413296 527 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 Z68868.1-201ENST00000429048 544 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 ANKRD54P1-201ENST00000433115 471 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC092170.1-201ENST00000440211 356 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 PTMAP1-205ENST00000455552 325 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 RNU7-140P-201ENST00000459546 60 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AC107015.1-201ENST00000466902 747 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 TUBBP11-201ENST00000472255 252 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 RN7SL516P-201ENST00000496127 297 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 MTND5P13-201ENST00000513046 1079 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 SEPT10P1-201ENST00000517342 1162 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 HIGD1AP18-201ENST00000520730 278 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 OR5AK3P-201ENST00000527486 1297 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 OR7E96P-201ENST00000530816 976 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.58□□□□□ -1.36
HOXC12P31275 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms