Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.6□□□□□ -1.51
SHC1P29353 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.6□□□□□ -1.51
SHC1P29353 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.6□□□□□ -1.51
SHC1P29353 MRPS21P8-201ENST00000569196 235 ntBASIC5.6□□□□□ -1.51
SHC1P29353 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 PCA3_2.1-201ENST00000612507 409 ntBASIC5.6□□□□□ -1.51
SHC1P29353 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.6□□□□□ -1.51
SHC1P29353 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 AL357140.4-201ENST00000636827 412 ntBASIC5.6□□□□□ -1.51
SHC1P29353 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 AC092070.2-203ENST00000598377 3644 ntBASIC5.6□□□□□ -1.51
SHC1P29353 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.6□□□□□ -1.51
SHC1P29353 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SHC1P29353 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.59□□□□□ -1.51
SHC1P29353 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.59□□□□□ -1.51
SHC1P29353 MTND5P12-201ENST00000502851 1449 ntBASIC5.59□□□□□ -1.51
SHC1P29353 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SHC1P29353 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.59□□□□□ -1.51
SHC1P29353 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.59□□□□□ -1.51
SHC1P29353 AC107977.1-201ENST00000355745 939 ntBASIC5.59□□□□□ -1.51
SHC1P29353 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.59□□□□□ -1.51
SHC1P29353 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.59□□□□□ -1.51
SHC1P29353 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.59□□□□□ -1.51
SHC1P29353 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.59□□□□□ -1.51
SHC1P29353 YY1P1-201ENST00000427625 668 ntBASIC5.59□□□□□ -1.51
SHC1P29353 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 GAPDHP23-201ENST00000444823 993 ntBASIC5.59□□□□□ -1.51
SHC1P29353 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.59□□□□□ -1.51
SHC1P29353 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.59□□□□□ -1.51
SHC1P29353 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.59□□□□□ -1.51
SHC1P29353 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.59□□□□□ -1.51
SHC1P29353 RNA5SP400-201ENST00000517155 111 ntBASIC5.59□□□□□ -1.51
SHC1P29353 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.59□□□□□ -1.51
SHC1P29353 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.59□□□□□ -1.51
SHC1P29353 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.59□□□□□ -1.51
SHC1P29353 AC023310.2-201ENST00000553844 547 ntBASIC5.59□□□□□ -1.51
SHC1P29353 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.59□□□□□ -1.51
SHC1P29353 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.59□□□□□ -1.51
SHC1P29353 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.59□□□□□ -1.51
SHC1P29353 RNU4ATAC-201ENST00000580972 127 ntBASIC5.59□□□□□ -1.51
SHC1P29353 MIR4701-201ENST00000583094 63 ntBASIC5.59□□□□□ -1.51
SHC1P29353 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.59□□□□□ -1.51
SHC1P29353 NPIPB1P-202ENST00000588786 828 ntBASIC5.59□□□□□ -1.51
SHC1P29353 DYNLL1P1-201ENST00000595442 269 ntBASIC5.59□□□□□ -1.51
SHC1P29353 AC009237.12-201ENST00000604755 742 ntBASIC5.59□□□□□ -1.51
SHC1P29353 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.59□□□□□ -1.51
SHC1P29353 CFTRP2-201ENST00000634304 199 ntBASIC5.59□□□□□ -1.51
SHC1P29353 AC116667.2-201ENST00000641075 823 ntBASIC5.59□□□□□ -1.51
SHC1P29353 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 NCOA4P2-201ENST00000340589 1813 ntBASIC5.59□□□□□ -1.51
SHC1P29353 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHC1P29353 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.59□□□□□ -1.52
SHC1P29353 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
SHC1P29353 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.59□□□□□ -1.52
SHC1P29353 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.59□□□□□ -1.52
SHC1P29353 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SHC1P29353 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.59□□□□□ -1.52
SHC1P29353 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.59□□□□□ -1.52
SHC1P29353 AC083837.1-201ENST00000565297 2994 ntBASIC5.58□□□□□ -1.52
SHC1P29353 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.58□□□□□ -1.52
SHC1P29353 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.58□□□□□ -1.52
SHC1P29353 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.58□□□□□ -1.52
SHC1P29353 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.58□□□□□ -1.52
SHC1P29353 AC010401.2-201ENST00000575137 4934 ntBASIC5.58□□□□□ -1.52
SHC1P29353 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.58□□□□□ -1.52
SHC1P29353 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 AC024587.1-201ENST00000505925 2157 ntBASIC5.58□□□□□ -1.52
SHC1P29353 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SHC1P29353 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.58□□□□□ -1.52
SHC1P29353 RNU1-65P-201ENST00000363919 148 ntBASIC5.58□□□□□ -1.52
SHC1P29353 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.58□□□□□ -1.52
SHC1P29353 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.58□□□□□ -1.52
SHC1P29353 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.58□□□□□ -1.52
SHC1P29353 AL354707.3-201ENST00000427308 331 ntBASIC5.58□□□□□ -1.52
SHC1P29353 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.58□□□□□ -1.52
SHC1P29353 AC010240.2-201ENST00000445363 1205 ntBASIC5.58□□□□□ -1.52
SHC1P29353 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.58□□□□□ -1.52
SHC1P29353 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.58□□□□□ -1.52
SHC1P29353 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.58□□□□□ -1.52
SHC1P29353 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.58□□□□□ -1.52
SHC1P29353 OR7E99P-201ENST00000505750 922 ntBASIC5.58□□□□□ -1.52
SHC1P29353 AC091874.2-201ENST00000505889 720 ntBASIC5.58□□□□□ -1.52
SHC1P29353 AC093815.1-201ENST00000508637 280 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms