Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL135978.1-201ENST00000553618 1266 ntBASIC7.92□□□□□ -1.14
LIG1P18858 AC090971.3-201ENST00000557871 1041 ntBASIC7.92□□□□□ -1.14
LIG1P18858 AGGF1P7-201ENST00000562369 913 ntBASIC7.92□□□□□ -1.14
LIG1P18858 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.92□□□□□ -1.14
LIG1P18858 CCDC58P1-201ENST00000578567 430 ntBASIC7.92□□□□□ -1.14
LIG1P18858 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC7.92□□□□□ -1.14
LIG1P18858 AL353778.1-201ENST00000603149 408 ntBASIC7.92□□□□□ -1.14
LIG1P18858 AL583856.2-201ENST00000606298 543 ntBASIC7.92□□□□□ -1.14
LIG1P18858 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC7.92□□□□□ -1.14
LIG1P18858 AL096803.3-201ENST00000609032 532 ntBASIC7.92□□□□□ -1.14
LIG1P18858 AL392048.1-201ENST00000613946 534 ntBASIC7.92□□□□□ -1.14
LIG1P18858 AC241377.1-201ENST00000619797 406 ntBASIC7.92□□□□□ -1.14
LIG1P18858 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.92□□□□□ -1.14
LIG1P18858 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.92□□□□□ -1.14
LIG1P18858 OR7A1P-202ENST00000641542 1158 ntBASIC7.92□□□□□ -1.14
LIG1P18858 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.92□□□□□ -1.14
LIG1P18858 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
LIG1P18858 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LIG1P18858 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LIG1P18858 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.92□□□□□ -1.14
LIG1P18858 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIG1P18858 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.92□□□□□ -1.14
LIG1P18858 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIG1P18858 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.92□□□□□ -1.14
LIG1P18858 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.91□□□□□ -1.14
LIG1P18858 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 MIR421-201ENST00000365696 85 ntBASIC7.91□□□□□ -1.14
LIG1P18858 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 RNU6-192P-201ENST00000391253 100 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AP002784.2-201ENST00000397300 549 ntBASIC7.91□□□□□ -1.14
LIG1P18858 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.91□□□□□ -1.14
LIG1P18858 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.91□□□□□ -1.14
LIG1P18858 AL662791.3-201ENST00000413771 776 ntBASIC7.91□□□□□ -1.14
LIG1P18858 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 RPL23AP18-201ENST00000416139 468 ntBASIC7.91□□□□□ -1.14
LIG1P18858 QRSL1P2-201ENST00000418582 964 ntBASIC7.91□□□□□ -1.14
LIG1P18858 ARL2BPP3-201ENST00000421226 480 ntBASIC7.91□□□□□ -1.14
LIG1P18858 OSTCP5-201ENST00000425293 453 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AL390023.1-201ENST00000428836 262 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AL365396.1-201ENST00000430854 671 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.91□□□□□ -1.14
LIG1P18858 AL604028.2-201ENST00000437848 788 ntBASIC7.91□□□□□ -1.14
LIG1P18858 ARF4P4-201ENST00000439608 520 ntBASIC7.91□□□□□ -1.14
LIG1P18858 MTND1P1-201ENST00000445453 368 ntBASIC7.91□□□□□ -1.14
LIG1P18858 USP9YP25-201ENST00000457708 443 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 AF305872.1-201ENST00000485217 471 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AC023818.1-201ENST00000498379 384 ntBASIC7.91□□□□□ -1.14
LIG1P18858 RN7SL104P-201ENST00000498686 293 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.91□□□□□ -1.14
LIG1P18858 AC134698.4-201ENST00000523451 826 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AC084824.1-201ENST00000550917 1005 ntBASIC7.91□□□□□ -1.14
LIG1P18858 DUXAP6-201ENST00000553858 601 ntBASIC7.91□□□□□ -1.14
LIG1P18858 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 AC080078.2-201ENST00000603766 501 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AC024085.1-201ENST00000604299 432 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AC121247.2-201ENST00000604776 136 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AL353600.1-201ENST00000608148 251 ntBASIC7.91□□□□□ -1.14
LIG1P18858 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 AC026124.2-201ENST00000621847 656 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AP002782.1-201ENST00000623107 614 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AC120057.5-201ENST00000623840 154 ntBASIC7.91□□□□□ -1.14
LIG1P18858 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.91□□□□□ -1.14
LIG1P18858 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIG1P18858 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
LIG1P18858 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LIG1P18858 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LIG1P18858 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
LIG1P18858 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
LIG1P18858 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.9□□□□□ -1.14
LIG1P18858 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
LIG1P18858 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
LIG1P18858 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms