Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC245052.7-201ENST00000601161 359 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AL031429.2-201ENST00000602605 649 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC092944.2-201ENST00000605443 889 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 MIR6133-201ENST00000617057 108 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AL035425.4-201ENST00000624509 1063 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC132825.8-201ENST00000640783 297 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC003985.2-201ENST00000562268 1669 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 RN7SKP189-201ENST00000365042 330 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 SNORA70.6-201ENST00000383934 134 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AL161742.1-201ENST00000418154 584 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 MED28P4-201ENST00000433137 572 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 OSTCP2-201ENST00000437956 444 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AL136455.1-201ENST00000441083 1240 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 MORF4-201ENST00000447135 971 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 SLAMF6P1-201ENST00000451067 602 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC022080.2-201ENST00000452932 533 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 CBX1P2-201ENST00000453841 458 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 RN7SL492P-201ENST00000460700 295 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 NPM1P21-201ENST00000513394 762 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AP001646.2-201ENST00000528645 1156 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC007068.2-201ENST00000543168 395 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 BMS1P16-201ENST00000556075 1147 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AL137067.2-201ENST00000621202 131 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 OR7A1P-202ENST00000641542 1158 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 AC018809.2-201ENST00000602436 3823 ntBASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RBFOX3A6NFN3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 AC092376.2-201ENST00000622621 4116 ntBASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 RNA5SP429-201ENST00000363688 109 ntBASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 RN7SKP281-201ENST00000410472 352 ntBASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 RN7SKP166-201ENST00000410812 305 ntBASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.75□□□□□ -1.65
RBFOX3A6NFN3 AL138479.1-201ENST00000426913 484 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms