Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 ADAM24P-201ENST00000398655 2101 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 RNA5SP453-201ENST00000362503 119 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 RN7SKP128-201ENST00000364270 303 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AL359633.1-201ENST00000421403 310 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AHCYP8-201ENST00000425108 209 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AL354893.1-201ENST00000433735 348 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 CCNJP1-201ENST00000450600 1149 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AL162739.1-201ENST00000450606 307 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 RN7SL456P-201ENST00000469290 295 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 ST13P12-201ENST00000508958 1094 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC027229.1-201ENST00000583887 253 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 EXOSC3P2-201ENST00000594464 497 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC006272.2-201ENST00000594725 163 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC099777.1-201ENST00000603779 1070 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC024085.1-201ENST00000604299 432 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AL137246.1-201ENST00000607072 977 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 LINC02495-203ENST00000636704 242 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 PROS2P-201ENST00000474651 1951 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC007842.1-201ENST00000597336 2039 ntBASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KCNIP3Q9Y2W7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 PCAT14-202ENST00000627127 3935 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC027279.4-201ENST00000624371 2072 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AL022322.2-201ENST00000624072 20397 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AL138847.1-201ENST00000258651 546 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 RNA5SP187-201ENST00000384400 119 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AL590635.1-201ENST00000406314 586 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 RN7SKP30-201ENST00000411373 334 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 HMGN2P27-201ENST00000427352 270 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 GAPDHP14-201ENST00000450472 937 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 RPL23AP40-201ENST00000487630 390 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 ENPP7P3-201ENST00000509123 241 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 SETP21-201ENST00000514799 892 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AP006437.1-202ENST00000530327 933 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 MIR4800-201ENST00000537353 80 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms