Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AP003175.1-201ENST00000641383 6658 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC022325.1-201ENST00000502748 2199 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 RNU2-72P-201ENST00000411175 163 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 USP9YP19-201ENST00000412165 485 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 GABARAPL3-201ENST00000412799 354 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 MARK2P12-201ENST00000420129 585 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AL139415.1-201ENST00000424862 352 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AL121776.1-201ENST00000429337 372 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 GAPDHP75-201ENST00000433910 943 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 GAPDHP48-201ENST00000436626 961 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AL512605.1-202ENST00000441919 381 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AL359955.2-201ENST00000445380 353 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AL445665.1-202ENST00000452436 324 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 NFU1-207ENST00000462320 558 ntTSL 4 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC091965.3-201ENST00000506236 208 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 RPL7L1P4-201ENST00000513004 707 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 SNORD95-201ENST00000579879 68 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC005972.3-201ENST00000606304 481 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 OR7M1P-201ENST00000608946 533 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC084036.1-201ENST00000609190 508 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AL352984.2-201ENST00000611153 546 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC009032.1-201ENST00000617574 431 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC096708.4-201ENST00000620563 552 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 CDY11P-201ENST00000447168 1651 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AC104162.1-201ENST00000430831 2382 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 AL136531.3-201ENST00000624378 3658 ntBASIC7.62□□□□□ -1.19
RTFDC1Q9BY42 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 CUBNP3-201ENST00000457461 1784 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC011416.1-201ENST00000514947 1732 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AL132875.1-201ENST00000403623 949 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AL589994.1-201ENST00000404962 340 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 RNA5SP156-201ENST00000410250 110 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 RPL35AP31-201ENST00000418340 337 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AL445528.1-201ENST00000426330 420 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 PCBP2P1-201ENST00000437262 977 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 FTLP8-201ENST00000446770 267 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC092865.4-201ENST00000477936 615 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC008945.1-201ENST00000505144 499 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 RNU6-1334P-201ENST00000516032 105 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 KCTD9P6-201ENST00000522306 950 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC079600.1-201ENST00000550326 297 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AL121579.2-201ENST00000555466 590 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC015802.5-201ENST00000607478 399 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AL136370.1-201ENST00000608166 691 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms