Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AL157702.1-201ENST00000398764 426 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AL359885.1-201ENST00000415786 903 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC016027.5-201ENST00000427227 210 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AL645936.1-201ENST00000441979 518 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC016908.1-201ENST00000442571 1219 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 MORF4-201ENST00000447135 971 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC009963.4-201ENST00000448535 339 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC112187.1-201ENST00000455837 479 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 RNA5SP206-201ENST00000516703 121 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 BMS1P16-201ENST00000556075 1147 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC005828.7-201ENST00000607331 556 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC015799.1-201ENST00000622996 3122 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC018628.1-201ENST00000624147 3819 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC025470.1-201ENST00000510053 2032 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC137056.2-201ENST00000624055 1958 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AL139805.1-201ENST00000407837 289 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 RPL7AP14-201ENST00000424041 802 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AL139158.1-201ENST00000424719 340 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC099782.1-201ENST00000425889 474 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 RPL12P16-201ENST00000431098 498 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC094019.1-201ENST00000434678 472 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 CLNS1AP1-201ENST00000435954 682 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC010086.1-201ENST00000437359 1052 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 OR52E7P-201ENST00000452394 933 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 YRDCP3-201ENST00000456507 480 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC073594.1-201ENST00000462065 364 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 RN7SL104P-201ENST00000498686 293 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC113367.2-201ENST00000505749 160 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC093815.1-201ENST00000508637 280 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 NPIPB14P-203ENST00000532298 987 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC027334.1-201ENST00000603257 310 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.79□□□□□ -1.48
COL21A1Q96P44 MIR6889-201ENST00000613185 59 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 uc_338.29-201ENST00000615099 168 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC069234.4-201ENST00000621276 412 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC004656.1-201ENST00000568479 4951 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 AC092070.2-203ENST00000598377 3644 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms