Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC026367.3-201ENST00000619032 590 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AL512329.1-201ENST00000404600 1592 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC007485.2-201ENST00000623493 1667 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 ZNF806-201ENST00000438300 1774 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AP001284.1-201ENST00000528393 2118 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VPS50Q96JG6 NLRP3P1-201ENST00000622303 1785 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VPS50Q96JG6 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AL592494.2-201ENST00000425455 1548 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 STAG3L4-201ENST00000352103 530 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VPS50Q96JG6 FDPSP5-201ENST00000399474 1057 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AL355143.1-201ENST00000407101 841 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 RNU2-18P-201ENST00000411224 162 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 RPL12P49-201ENST00000441100 121 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC073072.2-201ENST00000447425 348 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 MGAT2P1-201ENST00000449718 797 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 MTND5P8-201ENST00000449817 1083 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AL139156.3-201ENST00000454802 394 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC019084.1-201ENST00000457337 432 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 SULT1D1P-201ENST00000458020 882 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 ANP32BP1-202ENST00000568553 737 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC126365.2-201ENST00000580630 379 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 MIR4433B-201ENST00000581329 102 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 MIR212-201ENST00000586026 110 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 VN1R81P-201ENST00000602085 372 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AL590032.1-201ENST00000604920 252 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC019257.2-201ENST00000605539 497 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 AC022306.3-201ENST00000619930 550 ntBASIC6.37□□□□□ -1.39
VPS50Q96JG6 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VPS50Q96JG6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
VPS50Q96JG6 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.37□□□□□ -1.39
VPS50Q96JG6 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VPS50Q96JG6 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 AL157831.2-201ENST00000564681 3095 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
VPS50Q96JG6 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC232271.1-201ENST00000602455 2715 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VPS50Q96JG6 WDR95P-201ENST00000425638 1542 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VPS50Q96JG6 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 RN7SKP186-201ENST00000365371 303 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 RCC2P2-201ENST00000422174 918 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 CRYGGP-201ENST00000443337 145 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC245291.3-201ENST00000443400 292 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 RN7SL836P-201ENST00000476140 296 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms