Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 AC091839.1-201ENST00000513087 269 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC024085.1-201ENST00000604299 432 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC113554.1-201ENST00000606284 490 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC002094.4-201ENST00000613598 307 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC069209.1-201ENST00000619282 651 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC007342.8-201ENST00000623278 678 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC005355.2-201ENST00000625064 484 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC135068.11-201ENST00000636378 921 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 MIR1302-1-201ENST00000637932 143 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC241585.4-201ENST00000640951 686 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 ZNF887P-201ENST00000431363 1407 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 AL512353.3-201ENST00000417517 1326 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 DCAF13P1-201ENST00000495256 1330 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.77□□□□□ -1
LRCH3Q96II8 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC8.77□□□□□ -1
LRCH3Q96II8 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
LRCH3Q96II8 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.77□□□□□ -1
LRCH3Q96II8 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC8.77□□□□□ -1
LRCH3Q96II8 CASC15-203ENST00000605917 4461 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AL022323.2-201ENST00000623239 3000 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 SUN5-201ENST00000356173 1254 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 RNA5SP448-201ENST00000363151 111 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 RNU6-483P-201ENST00000384088 108 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 MTCYBP36-201ENST00000404146 440 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 SOD1P1-201ENST00000407803 440 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 RNU4-55P-201ENST00000410731 137 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 USP9YP13-201ENST00000417797 480 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC019050.1-201ENST00000418508 492 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 GUSBP4-201ENST00000423899 672 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC093084.1-201ENST00000424233 687 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 NPM1P18-201ENST00000434232 732 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 MTND2P29-201ENST00000438595 412 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 SDCBPP1-201ENST00000440192 890 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AL022237.1-201ENST00000446663 358 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 MTND1P9-201ENST00000453775 944 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC021660.1-201ENST00000465006 554 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC008620.1-201ENST00000468453 592 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 RN7SL414P-201ENST00000469545 294 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 RPL15P21-201ENST00000495592 567 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC008799.1-201ENST00000495909 457 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 NPM1P27-201ENST00000502784 830 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 MTND6P16-201ENST00000504006 520 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC002456.2-201ENST00000509356 380 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 RN7SKP13-201ENST00000515933 244 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC105029.1-201ENST00000520250 669 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 OR4C1P-201ENST00000530880 937 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC027026.1-201ENST00000532323 742 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC011712.1-201ENST00000588959 234 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC113143.2-201ENST00000603849 394 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC007363.1-201ENST00000604736 620 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms