Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CDY7P-201ENST00000429883 1604 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
NEDD1Q8NHV4 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.08
NEDD1Q8NHV4 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 HSPD1P1-201ENST00000503199 1726 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 RNU6-636P-201ENST00000384598 107 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 GLS-204ENST00000409428 816 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 OFD1P18Y-201ENST00000420889 959 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 FO393414.1-201ENST00000428697 1184 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 MTND4LP16-201ENST00000440828 295 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC003071.1-201ENST00000451219 789 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AL358876.1-201ENST00000453364 1075 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC104763.1-201ENST00000475274 360 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 GOLGA5P1-201ENST00000507317 980 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC008868.1-201ENST00000509786 737 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC022447.1-201ENST00000515358 464 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC069366.1-201ENST00000583159 838 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC010327.2-201ENST00000587647 488 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC107993.1-201ENST00000591343 684 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AL031601.1-201ENST00000605702 394 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 PART1_1.1-201ENST00000611761 217 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC007671.1-201ENST00000616957 830 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC026367.3-201ENST00000619032 590 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC079248.2-201ENST00000623779 326 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC016717.3-201ENST00000624730 554 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AL049541.2-201ENST00000626377 555 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 OR5AK4P-201ENST00000635912 903 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC087565.3-203ENST00000641018 837 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 CDY19P-201ENST00000411668 1613 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 CDY18P-201ENST00000438294 1609 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 AC020978.8-201ENST00000571975 3022 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 DDX6P1-205ENST00000441966 1436 ntBASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.27□□□□□ -1.09
NEDD1Q8NHV4 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 NR1H5P-201ENST00000452683 1377 ntBASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 AL121949.2-201ENST00000403446 1548 ntBASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 RNU4-68P-201ENST00000364314 141 ntBASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 AL359715.1-201ENST00000404330 555 ntBASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 RN7SKP148-201ENST00000410179 275 ntBASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.26□□□□□ -1.09
NEDD1Q8NHV4 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms