Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RPS7P8-201ENST00000418311 581 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC015977.1-201ENST00000418887 292 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 DNAJC19P5-201ENST00000443295 316 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AP002453.1-201ENST00000492327 668 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 RN7SL568P-201ENST00000493069 298 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 RN7SL362P-201ENST00000494228 267 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC008945.1-201ENST00000505144 499 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC113367.2-201ENST00000505749 160 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC108103.1-201ENST00000511286 446 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 RNA5SP434-201ENST00000516647 121 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 TPM3P3-201ENST00000521343 354 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 OR4A41P-201ENST00000533053 928 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AL078601.3-201ENST00000573303 535 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC004890.3-201ENST00000605566 1095 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 uc_338.29-201ENST00000615099 168 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC099654.15-201ENST00000639802 509 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AC018717.1-201ENST00000457712 1505 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 AL121768.1-201ENST00000613917 2544 ntBASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC65Q8IXS2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AL121835.1-201ENST00000404250 354 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AC092865.3-201ENST00000425390 1026 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AL445687.2-201ENST00000458156 728 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 SLC25A51P1-201ENST00000468432 871 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AL035690.1-201ENST00000490892 383 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 RNA5SP441-201ENST00000516809 88 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AC021269.1-201ENST00000526860 705 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AC121758.1-202ENST00000556917 658 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 MIR4433B-201ENST00000581329 102 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 MIR4420-201ENST00000583944 77 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AC009237.12-201ENST00000604755 742 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AL080312.2-201ENST00000613001 630 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 AC005261.2-201ENST00000593427 4258 ntBASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC65Q8IXS2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 RN7SKP108-201ENST00000411367 328 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AL139158.1-201ENST00000424719 340 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms