Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL589863.1-201ENST00000595383 631 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AL021368.3-201ENST00000607119 578 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 MRPS6P2-201ENST00000381143 370 ntBASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AL121835.1-201ENST00000404250 354 ntBASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AL359092.1-201ENST00000417156 265 ntBASIC5.84□□□□□ -1.47
CCDC71Q8IV32 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 SETP9-201ENST00000423837 832 ntBASIC5.84□□□□□ -1.47
CCDC71Q8IV32 EIF5AP4-201ENST00000441206 465 ntBASIC5.84□□□□□ -1.47
CCDC71Q8IV32 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AC018645.1-201ENST00000505003 109 ntBASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AC008429.2-201ENST00000523057 864 ntBASIC5.84□□□□□ -1.47
CCDC71Q8IV32 NPIPB14P-203ENST00000532298 987 ntBASIC5.84□□□□□ -1.47
CCDC71Q8IV32 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 DPPA3P2-202ENST00000557188 1219 ntBASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC71Q8IV32 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.84□□□□□ -1.48
CCDC71Q8IV32 MTCO1P46-201ENST00000451639 1491 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 UBE2V1P14-201ENST00000415815 558 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC069154.1-201ENST00000432914 542 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC079922.1-201ENST00000443291 359 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 OR13K1P-201ENST00000444577 975 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AL445687.2-201ENST00000458156 728 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 GM2AP2-201ENST00000491764 562 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 RPL19P11-201ENST00000495944 589 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC008945.1-201ENST00000505144 499 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 HMGN1P17-201ENST00000513734 295 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 SCARNA5-201ENST00000516201 276 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 IGKV2-19-201ENST00000518132 283 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC005632.2-201ENST00000564271 828 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC004805.3-201ENST00000603178 310 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 U1.41-201ENST00000617626 165 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 HCFC2P1-201ENST00000392864 1592 ntBASIC5.83□□□□□ -1.48
CCDC71Q8IV32 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms