Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 CDC27P1-201ENST00000445384 715 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 snoU13.22-201ENST00000459428 104 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 AC009127.1-201ENST00000467090 155 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 RNA5SP373-201ENST00000517271 95 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKDCP78527 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKDCP78527 MIR4270-201ENST00000581799 70 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 BNIP3P11-201ENST00000603878 563 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 AC090527.3-201ENST00000619041 548 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PRKDCP78527 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 AL050305.1-201ENST00000399993 1230 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.1□□□□□ -1.75
PRKDCP78527 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKDCP78527 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.1□□□□□ -1.75
PRKDCP78527 AC092647.2-201ENST00000452998 253 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 AL035690.1-201ENST00000490892 383 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 ABCA11P-202ENST00000504019 2110 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.1□□□□□ -1.75
PRKDCP78527 AL031320.1-201ENST00000604177 357 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 AC104118.1-201ENST00000607625 1589 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 AC092821.3-202ENST00000641304 2767 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC4.1□□□□□ -1.75
PRKDCP78527 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKDCP78527 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKDCP78527 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKDCP78527 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.1□□□□□ -1.75
PRKDCP78527 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.1□□□□□ -1.75
PRKDCP78527 MIR4298-201ENST00000584380 73 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 AC092653.1-201ENST00000608509 531 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC4.1□□□□□ -1.75
PRKDCP78527 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 AL359757.1-201ENST00000623176 255 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PRKDCP78527 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRKDCP78527 IMMTP1-201ENST00000435590 2219 ntBASIC4.1□□□□□ -1.75
PRKDCP78527 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 AL449283.1-201ENST00000602631 3403 ntBASIC4.09□□□□□ -1.75
PRKDCP78527 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
PRKDCP78527 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 BMS1P19-201ENST00000433925 393 ntBASIC4.09□□□□□ -1.75
PRKDCP78527 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKDCP78527 AC091042.1-201ENST00000579213 173 ntBASIC4.09□□□□□ -1.75
PRKDCP78527 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKDCP78527 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKDCP78527 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.09□□□□□ -1.75
PRKDCP78527 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PRKDCP78527 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC4.09□□□□□ -1.75
PRKDCP78527 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC4.09□□□□□ -1.75
PRKDCP78527 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PRKDCP78527 AC022905.1-201ENST00000503430 3048 ntBASIC4.09□□□□□ -1.75
PRKDCP78527 DUTP4-201ENST00000424782 475 ntBASIC4.09□□□□□ -1.75
PRKDCP78527 DSTNP5-201ENST00000427921 523 ntBASIC4.09□□□□□ -1.75
PRKDCP78527 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.09□□□□□ -1.75
PRKDCP78527 RPS27AP3-201ENST00000453803 454 ntBASIC4.09□□□□□ -1.75
PRKDCP78527 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.09□□□□□ -1.75
PRKDCP78527 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKDCP78527 AC010343.2-201ENST00000510162 224 ntBASIC4.09□□□□□ -1.75
PRKDCP78527 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.09□□□□□ -1.75
PRKDCP78527 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.09□□□□□ -1.75
PRKDCP78527 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKDCP78527 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKDCP78527 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC4.09□□□□□ -1.75
PRKDCP78527 AC067931.1-201ENST00000624190 671 ntBASIC4.09□□□□□ -1.75
PRKDCP78527 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PRKDCP78527 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRKDCP78527 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.09□□□□□ -1.76
PRKDCP78527 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.09□□□□□ -1.76
PRKDCP78527 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms