Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.38□□□□□ -1.55
UBA52P62987 AC099782.1-201ENST00000425889 474 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AC115283.1-201ENST00000427353 400 ntBASIC5.38□□□□□ -1.55
UBA52P62987 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.38□□□□□ -1.55
UBA52P62987 AL022319.1-201ENST00000458183 1167 ntBASIC5.38□□□□□ -1.55
UBA52P62987 SNX18P26-201ENST00000458433 740 ntBASIC5.38□□□□□ -1.55
UBA52P62987 RN7SL39P-201ENST00000462264 297 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.38□□□□□ -1.55
UBA52P62987 AC083806.1-201ENST00000468934 316 ntBASIC5.38□□□□□ -1.55
UBA52P62987 RN7SL187P-201ENST00000495587 303 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AC091874.2-201ENST00000505889 720 ntBASIC5.38□□□□□ -1.55
UBA52P62987 HSD3BP3-201ENST00000514706 994 ntBASIC5.38□□□□□ -1.55
UBA52P62987 RNA5SP441-201ENST00000516809 88 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AC135983.3-201ENST00000528049 1226 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.38□□□□□ -1.55
UBA52P62987 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.38□□□□□ -1.55
UBA52P62987 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
UBA52P62987 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.38□□□□□ -1.55
UBA52P62987 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.38□□□□□ -1.55
UBA52P62987 AC002310.3-201ENST00000569728 723 ntBASIC5.38□□□□□ -1.55
UBA52P62987 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBA52P62987 AL078601.3-201ENST00000573303 535 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AC005726.4-201ENST00000582858 458 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.38□□□□□ -1.55
UBA52P62987 GLYATL1P2-202ENST00000588046 902 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.38□□□□□ -1.55
UBA52P62987 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.38□□□□□ -1.55
UBA52P62987 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.38□□□□□ -1.55
UBA52P62987 AC016745.2-201ENST00000608834 3443 ntBASIC5.38□□□□□ -1.55
UBA52P62987 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UBA52P62987 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBA52P62987 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
UBA52P62987 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBA52P62987 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.38□□□□□ -1.55
UBA52P62987 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.37□□□□□ -1.55
UBA52P62987 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.37□□□□□ -1.55
UBA52P62987 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 RNA5SP77-201ENST00000365394 120 ntBASIC5.37□□□□□ -1.55
UBA52P62987 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 U3.52-201ENST00000384034 216 ntBASIC5.37□□□□□ -1.55
UBA52P62987 RNU6-316P-201ENST00000391027 107 ntBASIC5.37□□□□□ -1.55
UBA52P62987 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.37□□□□□ -1.55
UBA52P62987 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.37□□□□□ -1.55
UBA52P62987 AL663061.1-201ENST00000416625 580 ntBASIC5.37□□□□□ -1.55
UBA52P62987 VN1R20P-201ENST00000425215 966 ntBASIC5.37□□□□□ -1.55
UBA52P62987 AL365220.1-201ENST00000432923 399 ntBASIC5.37□□□□□ -1.55
UBA52P62987 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.37□□□□□ -1.55
UBA52P62987 GAPDHP59-201ENST00000435908 267 ntBASIC5.37□□□□□ -1.55
UBA52P62987 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 HMGN1P2-201ENST00000445197 310 ntBASIC5.37□□□□□ -1.55
UBA52P62987 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 RPL26P30-201ENST00000453533 435 ntBASIC5.37□□□□□ -1.55
UBA52P62987 AC018638.3-201ENST00000461273 132 ntBASIC5.37□□□□□ -1.55
UBA52P62987 RN7SL552P-201ENST00000462094 276 ntBASIC5.37□□□□□ -1.55
UBA52P62987 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.37□□□□□ -1.55
UBA52P62987 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.37□□□□□ -1.55
UBA52P62987 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.37□□□□□ -1.55
UBA52P62987 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.37□□□□□ -1.55
UBA52P62987 NPM1P42-201ENST00000560329 862 ntBASIC5.37□□□□□ -1.55
UBA52P62987 AC106785.4-201ENST00000569492 412 ntBASIC5.37□□□□□ -1.55
UBA52P62987 MIR4502-201ENST00000580432 81 ntBASIC5.37□□□□□ -1.55
UBA52P62987 SYPL1P2-201ENST00000582878 727 ntBASIC5.37□□□□□ -1.55
UBA52P62987 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.37□□□□□ -1.55
UBA52P62987 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.37□□□□□ -1.55
UBA52P62987 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 AC022400.9-201ENST00000623633 273 ntBASIC5.37□□□□□ -1.55
UBA52P62987 SNORA16A-202ENST00000628458 135 ntBASIC5.37□□□□□ -1.55
UBA52P62987 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
UBA52P62987 PSMC1P4-201ENST00000515236 1327 ntBASIC5.37□□□□□ -1.55
UBA52P62987 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
UBA52P62987 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 QRSL1P1-201ENST00000400977 1540 ntBASIC5.37□□□□□ -1.55
UBA52P62987 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.37□□□□□ -1.55
UBA52P62987 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 BX284613.1-201ENST00000452221 1641 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms