Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 AP001541.1-201ENST00000623322 1904 ntBASIC5.07□□□□□ -1.6
LMO4P61968 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO4P61968 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AC024587.1-201ENST00000505925 2157 ntBASIC5.06□□□□□ -1.6
LMO4P61968 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 AC006600.2-201ENST00000624834 2506 ntBASIC5.06□□□□□ -1.6
LMO4P61968 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
LMO4P61968 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.06□□□□□ -1.6
LMO4P61968 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.06□□□□□ -1.6
LMO4P61968 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.06□□□□□ -1.6
LMO4P61968 AC022905.1-201ENST00000503430 3048 ntBASIC5.06□□□□□ -1.6
LMO4P61968 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LMO4P61968 AC093829.1-201ENST00000506662 1618 ntBASIC5.06□□□□□ -1.6
LMO4P61968 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.06□□□□□ -1.6
LMO4P61968 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
LMO4P61968 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LMO4P61968 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LMO4P61968 RNU105B-201ENST00000364478 208 ntBASIC5.06□□□□□ -1.6
LMO4P61968 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.06□□□□□ -1.6
LMO4P61968 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.06□□□□□ -1.6
LMO4P61968 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.06□□□□□ -1.6
LMO4P61968 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.06□□□□□ -1.6
LMO4P61968 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.06□□□□□ -1.6
LMO4P61968 AC245884.2-201ENST00000426257 404 ntBASIC5.06□□□□□ -1.6
LMO4P61968 GAPDHP75-201ENST00000433910 943 ntBASIC5.06□□□□□ -1.6
LMO4P61968 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.06□□□□□ -1.6
LMO4P61968 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.06□□□□□ -1.6
LMO4P61968 PPIAP20-201ENST00000449839 135 ntBASIC5.06□□□□□ -1.6
LMO4P61968 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.06□□□□□ -1.6
LMO4P61968 AC011476.1-201ENST00000466725 307 ntBASIC5.06□□□□□ -1.6
LMO4P61968 AC007998.1-201ENST00000474156 672 ntBASIC5.06□□□□□ -1.6
LMO4P61968 PPIAP19-201ENST00000486414 492 ntBASIC5.06□□□□□ -1.6
LMO4P61968 MTATP6P1-201ENST00000514057 681 ntBASIC5.06□□□□□ -1.6
LMO4P61968 AC073581.1-201ENST00000519036 575 ntBASIC5.06□□□□□ -1.6
LMO4P61968 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.06□□□□□ -1.6
LMO4P61968 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.06□□□□□ -1.6
LMO4P61968 AC012146.2-201ENST00000576545 416 ntBASIC5.06□□□□□ -1.6
LMO4P61968 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.06□□□□□ -1.6
LMO4P61968 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
LMO4P61968 AC119674.1-202ENST00000641333 1860 ntBASIC5.06□□□□□ -1.6
LMO4P61968 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LMO4P61968 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
LMO4P61968 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.06□□□□□ -1.6
LMO4P61968 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 RBPJP7-201ENST00000442803 1447 ntBASIC5.06□□□□□ -1.6
LMO4P61968 RBPJP5-201ENST00000449433 1447 ntBASIC5.06□□□□□ -1.6
LMO4P61968 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMO4P61968 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
LMO4P61968 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
LMO4P61968 AC007342.9-201ENST00000623877 1385 ntBASIC5.05□□□□□ -1.6
LMO4P61968 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC5.05□□□□□ -1.6
LMO4P61968 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.05□□□□□ -1.6
LMO4P61968 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.05□□□□□ -1.6
LMO4P61968 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LMO4P61968 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LMO4P61968 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 RNA5SP333-201ENST00000363466 118 ntBASIC5.05□□□□□ -1.6
LMO4P61968 RNA5SP334-201ENST00000364825 118 ntBASIC5.05□□□□□ -1.6
LMO4P61968 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
LMO4P61968 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO4P61968 NPM1P10-201ENST00000398310 865 ntBASIC5.05□□□□□ -1.6
LMO4P61968 MIR1203-201ENST00000408812 85 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.05□□□□□ -1.6
LMO4P61968 RPL35AP3-201ENST00000414680 288 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.05□□□□□ -1.6
LMO4P61968 AC013470.3-201ENST00000420252 1194 ntBASIC5.05□□□□□ -1.6
LMO4P61968 BX284632.2-201ENST00000421091 399 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AL035660.1-201ENST00000422041 222 ntBASIC5.05□□□□□ -1.6
LMO4P61968 HSFY1P1-201ENST00000423928 1178 ntBASIC5.05□□□□□ -1.6
LMO4P61968 MTND6P12-201ENST00000428247 522 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AL512605.1-202ENST00000441919 381 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AC009237.1-201ENST00000442127 744 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AL512593.1-201ENST00000444758 779 ntBASIC5.05□□□□□ -1.6
LMO4P61968 AL359955.2-201ENST00000445380 353 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms