Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 AC105749.1-201ENST00000631338 2008 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGCS2P54868 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGCS2P54868 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HMGCS2P54868 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGCS2P54868 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
HMGCS2P54868 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7□□□□□ -1.29
HMGCS2P54868 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HMGCS2P54868 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGCS2P54868 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HMGCS2P54868 MIR143-201ENST00000385300 106 ntBASIC7□□□□□ -1.29
HMGCS2P54868 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7□□□□□ -1.29
HMGCS2P54868 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7□□□□□ -1.29
HMGCS2P54868 AC126120.1-201ENST00000431082 470 ntBASIC7□□□□□ -1.29
HMGCS2P54868 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7□□□□□ -1.29
HMGCS2P54868 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7□□□□□ -1.29
HMGCS2P54868 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7□□□□□ -1.29
HMGCS2P54868 IGHV1-14-201ENST00000523391 241 ntBASIC7□□□□□ -1.29
HMGCS2P54868 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGCS2P54868 AC091078.2-201ENST00000557145 559 ntBASIC7□□□□□ -1.29
HMGCS2P54868 AP001496.3-201ENST00000580230 913 ntBASIC7□□□□□ -1.29
HMGCS2P54868 AL589674.2-201ENST00000604304 337 ntBASIC7□□□□□ -1.29
HMGCS2P54868 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7□□□□□ -1.29
HMGCS2P54868 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGCS2P54868 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
HMGCS2P54868 AL133243.4-201ENST00000623116 3109 ntBASIC7□□□□□ -1.29
HMGCS2P54868 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HMGCS2P54868 AL662795.2-201ENST00000624252 3706 ntBASIC7□□□□□ -1.29
HMGCS2P54868 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HMGCS2P54868 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7□□□□□ -1.29
HMGCS2P54868 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.99□□□□□ -1.29
HMGCS2P54868 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 PDZK1P1-202ENST00000425209 1350 ntBASIC6.99□□□□□ -1.29
HMGCS2P54868 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
HMGCS2P54868 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.99□□□□□ -1.29
HMGCS2P54868 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
HMGCS2P54868 RPL34P3-201ENST00000421454 338 ntBASIC6.99□□□□□ -1.29
HMGCS2P54868 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.99□□□□□ -1.29
HMGCS2P54868 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.99□□□□□ -1.29
HMGCS2P54868 AC008638.1-201ENST00000506035 866 ntBASIC6.99□□□□□ -1.29
HMGCS2P54868 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.99□□□□□ -1.29
HMGCS2P54868 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
HMGCS2P54868 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.99□□□□□ -1.29
HMGCS2P54868 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.99□□□□□ -1.29
HMGCS2P54868 AC016180.1-201ENST00000567945 403 ntBASIC6.99□□□□□ -1.29
HMGCS2P54868 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 AC104695.2-201ENST00000605056 775 ntBASIC6.99□□□□□ -1.29
HMGCS2P54868 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.99□□□□□ -1.29
HMGCS2P54868 AP000864.1-201ENST00000609424 650 ntBASIC6.99□□□□□ -1.29
HMGCS2P54868 AC022726.2-201ENST00000634673 547 ntBASIC6.99□□□□□ -1.29
HMGCS2P54868 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.99□□□□□ -1.29
HMGCS2P54868 PARP4P2-201ENST00000446672 3326 ntBASIC6.99□□□□□ -1.29
HMGCS2P54868 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.99□□□□□ -1.29
HMGCS2P54868 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.99□□□□□ -1.29
HMGCS2P54868 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HMGCS2P54868 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.99□□□□□ -1.29
HMGCS2P54868 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.99□□□□□ -1.29
HMGCS2P54868 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.99□□□□□ -1.29
HMGCS2P54868 AL359091.1-201ENST00000449048 1734 ntBASIC6.98□□□□□ -1.29
HMGCS2P54868 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
HMGCS2P54868 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 Z82209.2-201ENST00000623410 2012 ntBASIC6.98□□□□□ -1.29
HMGCS2P54868 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.98□□□□□ -1.29
HMGCS2P54868 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HMGCS2P54868 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 OR10R3P-201ENST00000361688 942 ntBASIC6.98□□□□□ -1.29
HMGCS2P54868 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGCS2P54868 AC016739.1-201ENST00000405359 345 ntBASIC6.98□□□□□ -1.29
HMGCS2P54868 OR3A2-201ENST00000408891 1076 ntBASIC6.98□□□□□ -1.29
HMGCS2P54868 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGCS2P54868 AC127526.2-201ENST00000426436 775 ntBASIC6.98□□□□□ -1.29
HMGCS2P54868 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGCS2P54868 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGCS2P54868 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 EIF3LP3-201ENST00000495197 822 ntBASIC6.98□□□□□ -1.29
HMGCS2P54868 AC008629.2-201ENST00000503783 483 ntBASIC6.98□□□□□ -1.29
HMGCS2P54868 AC024451.1-201ENST00000508013 779 ntBASIC6.98□□□□□ -1.29
HMGCS2P54868 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGCS2P54868 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGCS2P54868 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms