Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.07□□□□□ -1.44
PDX1P52945 AC022960.2-201ENST00000616300 666 ntBASIC6.07□□□□□ -1.44
PDX1P52945 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDX1P52945 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PDX1P52945 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PDX1P52945 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
PDX1P52945 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.07□□□□□ -1.44
PDX1P52945 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 AC009831.5-201ENST00000624000 3189 ntBASIC6.07□□□□□ -1.44
PDX1P52945 OLMALINC-203ENST00000641087 3779 ntBASIC6.07□□□□□ -1.44
PDX1P52945 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDX1P52945 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PDX1P52945 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.06□□□□□ -1.44
PDX1P52945 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDX1P52945 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.06□□□□□ -1.44
PDX1P52945 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PDX1P52945 AC089998.1-201ENST00000548575 3141 ntBASIC6.06□□□□□ -1.44
PDX1P52945 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PDX1P52945 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.06□□□□□ -1.44
PDX1P52945 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.06□□□□□ -1.44
PDX1P52945 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDX1P52945 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.06□□□□□ -1.44
PDX1P52945 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PDX1P52945 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.06□□□□□ -1.44
PDX1P52945 RNA5SP477-201ENST00000362639 119 ntBASIC6.06□□□□□ -1.44
PDX1P52945 SNORA51.1-201ENST00000363243 140 ntBASIC6.06□□□□□ -1.44
PDX1P52945 RNA5SP510-201ENST00000364697 99 ntBASIC6.06□□□□□ -1.44
PDX1P52945 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.06□□□□□ -1.44
PDX1P52945 AL050335.1-201ENST00000396909 869 ntBASIC6.06□□□□□ -1.44
PDX1P52945 RFESDP1-201ENST00000422350 461 ntBASIC6.06□□□□□ -1.44
PDX1P52945 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDX1P52945 IGLV3-4-201ENST00000432300 244 ntBASIC6.06□□□□□ -1.44
PDX1P52945 RPL23AP19-201ENST00000436229 369 ntBASIC6.06□□□□□ -1.44
PDX1P52945 HIGD1AP16-201ENST00000450986 258 ntBASIC6.06□□□□□ -1.44
PDX1P52945 CST12P-201ENST00000457644 362 ntBASIC6.06□□□□□ -1.44
PDX1P52945 RPL34P33-201ENST00000486062 334 ntBASIC6.06□□□□□ -1.44
PDX1P52945 RN7SL714P-201ENST00000487050 298 ntBASIC6.06□□□□□ -1.44
PDX1P52945 MTND6P8-201ENST00000503471 522 ntBASIC6.06□□□□□ -1.44
PDX1P52945 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.06□□□□□ -1.44
PDX1P52945 OR5H7P-201ENST00000514084 930 ntBASIC6.06□□□□□ -1.44
PDX1P52945 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.06□□□□□ -1.44
PDX1P52945 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.06□□□□□ -1.44
PDX1P52945 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.06□□□□□ -1.44
PDX1P52945 AC022826.1-201ENST00000519383 805 ntBASIC6.06□□□□□ -1.44
PDX1P52945 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.06□□□□□ -1.44
PDX1P52945 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.06□□□□□ -1.44
PDX1P52945 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.06□□□□□ -1.44
PDX1P52945 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDX1P52945 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.06□□□□□ -1.44
PDX1P52945 AC011445.2-201ENST00000599274 173 ntBASIC6.06□□□□□ -1.44
PDX1P52945 AC011497.2-201ENST00000600255 639 ntBASIC6.06□□□□□ -1.44
PDX1P52945 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.06□□□□□ -1.44
PDX1P52945 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.06□□□□□ -1.44
PDX1P52945 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.06□□□□□ -1.44
PDX1P52945 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.06□□□□□ -1.44
PDX1P52945 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDX1P52945 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDX1P52945 MIPEPP2-201ENST00000422560 1819 ntBASIC6.06□□□□□ -1.44
PDX1P52945 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDX1P52945 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
PDX1P52945 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PDX1P52945 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PDX1P52945 AC008627.1-201ENST00000517511 1704 ntBASIC6.05□□□□□ -1.44
PDX1P52945 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 ZNF658B-201ENST00000602828 3408 ntBASIC6.05□□□□□ -1.44
PDX1P52945 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 EIF3EP1-201ENST00000433978 1316 ntBASIC6.05□□□□□ -1.44
PDX1P52945 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.05□□□□□ -1.44
PDX1P52945 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.05□□□□□ -1.44
PDX1P52945 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PDX1P52945 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 AC023490.2-201ENST00000359859 470 ntBASIC6.05□□□□□ -1.44
PDX1P52945 RNA5SP273-201ENST00000362484 113 ntBASIC6.05□□□□□ -1.44
PDX1P52945 SNORA17A-201ENST00000391185 133 ntBASIC6.05□□□□□ -1.44
PDX1P52945 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.05□□□□□ -1.44
PDX1P52945 AL096800.1-201ENST00000405326 893 ntBASIC6.05□□□□□ -1.44
PDX1P52945 AC130360.1-201ENST00000425489 1117 ntBASIC6.05□□□□□ -1.44
PDX1P52945 MTND6P12-201ENST00000428247 522 ntBASIC6.05□□□□□ -1.44
PDX1P52945 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 MGAT2P1-201ENST00000449718 797 ntBASIC6.05□□□□□ -1.44
PDX1P52945 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.05□□□□□ -1.44
PDX1P52945 AC098847.1-201ENST00000473094 348 ntBASIC6.05□□□□□ -1.44
PDX1P52945 RN7SL326P-201ENST00000477493 296 ntBASIC6.05□□□□□ -1.44
PDX1P52945 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.05□□□□□ -1.44
PDX1P52945 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.05□□□□□ -1.44
PDX1P52945 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.05□□□□□ -1.44
PDX1P52945 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.05□□□□□ -1.44
PDX1P52945 AC084337.1-201ENST00000524809 686 ntBASIC6.05□□□□□ -1.44
PDX1P52945 AC130365.2-201ENST00000525882 1201 ntBASIC6.05□□□□□ -1.44
PDX1P52945 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.05□□□□□ -1.44
PDX1P52945 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.05□□□□□ -1.44
PDX1P52945 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms