Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH3P22223 RNU1-65P-201ENST00000363919 148 ntBASIC6.17□□□□□ -1.42
CDH3P22223 RNA5SP279-201ENST00000365513 117 ntBASIC6.17□□□□□ -1.42
CDH3P22223 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
CDH3P22223 MIR188-201ENST00000385034 86 ntBASIC6.17□□□□□ -1.42
CDH3P22223 OOSP1-201ENST00000398992 1270 ntBASIC6.17□□□□□ -1.42
CDH3P22223 SNORA11.5-201ENST00000408163 128 ntBASIC6.17□□□□□ -1.42
CDH3P22223 MTND2P12-201ENST00000417560 1252 ntBASIC6.17□□□□□ -1.42
CDH3P22223 DPPA2P2-201ENST00000418220 897 ntBASIC6.17□□□□□ -1.42
CDH3P22223 AC099782.1-201ENST00000425889 474 ntBASIC6.17□□□□□ -1.42
CDH3P22223 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH3P22223 AC021006.1-201ENST00000489849 553 ntBASIC6.17□□□□□ -1.42
CDH3P22223 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH3P22223 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH3P22223 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH3P22223 RNA5SP473-201ENST00000516402 125 ntBASIC6.17□□□□□ -1.42
CDH3P22223 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH3P22223 BCAS2P1-201ENST00000528022 632 ntBASIC6.17□□□□□ -1.42
CDH3P22223 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH3P22223 AC107958.1-201ENST00000556576 290 ntBASIC6.17□□□□□ -1.42
CDH3P22223 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH3P22223 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH3P22223 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH3P22223 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.17□□□□□ -1.42
CDH3P22223 SNORA74.4-201ENST00000607595 199 ntBASIC6.17□□□□□ -1.42
CDH3P22223 AL591926.1-201ENST00000620542 217 ntBASIC6.17□□□□□ -1.42
CDH3P22223 AP003072.5-201ENST00000623872 773 ntBASIC6.17□□□□□ -1.42
CDH3P22223 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH3P22223 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH3P22223 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH3P22223 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
CDH3P22223 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDH3P22223 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH3P22223 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH3P22223 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH3P22223 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH3P22223 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CDH3P22223 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDH3P22223 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 AL161912.4-201ENST00000623889 2468 ntBASIC6.16□□□□□ -1.42
CDH3P22223 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDH3P22223 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDH3P22223 RNA5SP188-201ENST00000362916 129 ntBASIC6.16□□□□□ -1.42
CDH3P22223 RNU1-59P-201ENST00000364829 162 ntBASIC6.16□□□□□ -1.42
CDH3P22223 RBBP4P5-201ENST00000398583 1266 ntBASIC6.16□□□□□ -1.42
CDH3P22223 NPM1P37-201ENST00000403105 874 ntBASIC6.16□□□□□ -1.42
CDH3P22223 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.16□□□□□ -1.42
CDH3P22223 DHFRP2-201ENST00000414224 547 ntBASIC6.16□□□□□ -1.42
CDH3P22223 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH3P22223 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.16□□□□□ -1.42
CDH3P22223 POU5F1P5-201ENST00000445059 658 ntBASIC6.16□□□□□ -1.42
CDH3P22223 SUMO2P4-201ENST00000504193 276 ntBASIC6.16□□□□□ -1.42
CDH3P22223 AC091917.2-201ENST00000505002 744 ntBASIC6.16□□□□□ -1.42
CDH3P22223 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 AC108103.1-201ENST00000511286 446 ntBASIC6.16□□□□□ -1.42
CDH3P22223 SETP21-201ENST00000514799 892 ntBASIC6.16□□□□□ -1.42
CDH3P22223 Vault.2-201ENST00000516519 98 ntBASIC6.16□□□□□ -1.42
CDH3P22223 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDH3P22223 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 AC016839.1-201ENST00000578162 867 ntBASIC6.16□□□□□ -1.42
CDH3P22223 AC090616.1-201ENST00000583895 447 ntBASIC6.16□□□□□ -1.42
CDH3P22223 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDH3P22223 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 OR7A11P-201ENST00000597719 953 ntBASIC6.16□□□□□ -1.42
CDH3P22223 AL135999.3-201ENST00000610501 812 ntBASIC6.16□□□□□ -1.42
CDH3P22223 U1.25-201ENST00000614085 162 ntBASIC6.16□□□□□ -1.42
CDH3P22223 uc_338.31-201ENST00000615595 186 ntBASIC6.16□□□□□ -1.42
CDH3P22223 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.16□□□□□ -1.42
CDH3P22223 U1.34-201ENST00000618578 162 ntBASIC6.16□□□□□ -1.42
CDH3P22223 U1.31-201ENST00000620022 160 ntBASIC6.16□□□□□ -1.42
CDH3P22223 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.16□□□□□ -1.42
CDH3P22223 AC073592.6-201ENST00000624271 415 ntBASIC6.16□□□□□ -1.42
CDH3P22223 AC111152.1-202ENST00000635848 339 ntBASIC6.16□□□□□ -1.42
CDH3P22223 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDH3P22223 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CDH3P22223 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH3P22223 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 AC010624.4-201ENST00000597606 1351 ntBASIC6.16□□□□□ -1.42
CDH3P22223 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH3P22223 AC004656.1-201ENST00000568479 4951 ntBASIC6.16□□□□□ -1.42
CDH3P22223 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH3P22223 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH3P22223 AC006213.6-201ENST00000623722 4179 ntBASIC6.15□□□□□ -1.42
CDH3P22223 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH3P22223 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH3P22223 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms