Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
COL9A1P20849 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 ZNF812P-201ENST00000457674 1694 ntBASIC8.61□□□□□ -1.03
COL9A1P20849 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 KIAA1217-208ENST00000396446 3059 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 TRIM52-205ENST00000611618 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC8.61□□□□□ -1.03
COL9A1P20849 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC8.61□□□□□ -1.03
COL9A1P20849 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
COL9A1P20849 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
COL9A1P20849 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.61□□□□□ -1.03
COL9A1P20849 AL138690.1-201ENST00000568811 2243 ntBASIC8.61□□□□□ -1.03
COL9A1P20849 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.61□□□□□ -1.03
COL9A1P20849 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
COL9A1P20849 AC010478.1-201ENST00000601500 6762 ntBASIC8.61□□□□□ -1.03
COL9A1P20849 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC8.61□□□□□ -1.03
COL9A1P20849 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 EEF1A1P3-201ENST00000417549 1385 ntBASIC8.61□□□□□ -1.03
COL9A1P20849 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL9A1P20849 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 CD36-221ENST00000534394 1741 ntTSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 AC135731.2-201ENST00000603029 2098 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
COL9A1P20849 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 SNORA58.1-201ENST00000364133 136 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
COL9A1P20849 RNA5SP18-201ENST00000390935 121 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 MORF4L1P1-201ENST00000404582 967 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC8.6□□□□□ -1.03
COL9A1P20849 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 NAP1L1P2-201ENST00000414182 1089 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC113618.1-201ENST00000416747 285 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 RPSAP62-201ENST00000432596 833 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.6□□□□□ -1.03
COL9A1P20849 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC8.6□□□□□ -1.03
COL9A1P20849 CYP2C56P-201ENST00000440076 291 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC132479.1-201ENST00000449160 144 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 HNRNPCP7-201ENST00000456056 905 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 AC099521.1-201ENST00000482557 334 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 AC084017.1-201ENST00000483240 860 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 RAD51AP1P1-201ENST00000484195 1001 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 AC098799.3-201ENST00000506095 438 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 RPL7L1P4-201ENST00000513004 707 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 MTCO2P24-201ENST00000515611 426 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC8.6□□□□□ -1.03
COL9A1P20849 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC125494.2-201ENST00000602431 657 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC010591.1-201ENST00000603941 649 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 AC011816.2-201ENST00000607089 556 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC069499.2-201ENST00000610665 382 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 AC104237.2-201ENST00000612456 443 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.6□□□□□ -1.03
COL9A1P20849 AC100810.6-201ENST00000638068 285 ntBASIC8.6□□□□□ -1.03
COL9A1P20849 NHS-204ENST00000615422 8860 ntTSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
COL9A1P20849 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 RNF185-203ENST00000426256 3315 ntTSL 2 BASIC8.6□□□□□ -1.03
COL9A1P20849 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL9A1P20849 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
COL9A1P20849 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms