Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 RPL31P11-201ENST00000426558 1558 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 RNA5SP152-201ENST00000365184 110 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 RNA5SP355-201ENST00000365317 135 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 AL359633.1-201ENST00000421403 310 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 AL157884.1-201ENST00000424561 454 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 TCEA1P3-201ENST00000443005 880 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 CCNJP1-201ENST00000450600 1149 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 AC005165.2-201ENST00000466070 380 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 RN7SL776P-201ENST00000493390 268 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC4.63□□□□□ -1.67
CXCL1P09341 RPL7L1P7-201ENST00000509986 724 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.63□□□□□ -1.67
CXCL1P09341 AC078899.1-201ENST00000521432 1185 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 HNRNPCP8-201ENST00000528764 888 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.63□□□□□ -1.67
CXCL1P09341 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC4.63□□□□□ -1.67
CXCL1P09341 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 AP006587.6-201ENST00000582128 1091 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 DYNLL1P1-201ENST00000595442 269 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 AC004805.3-201ENST00000603178 310 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 AL353729.2-201ENST00000605859 1249 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 AL133481.2-203ENST00000607558 139 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 AC099654.15-201ENST00000639802 509 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 AC104260.2-201ENST00000623551 3497 ntBASIC4.63□□□□□ -1.67
CXCL1P09341 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL1P09341 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 TCP1P3-201ENST00000414406 1498 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 AC083899.1-201ENST00000454465 3819 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 ADAM5-202ENST00000399789 1942 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.62□□□□□ -1.67
CXCL1P09341 AC011755.1-201ENST00000623763 2049 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.62□□□□□ -1.67
CXCL1P09341 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.62□□□□□ -1.67
CXCL1P09341 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 PPIAP24-201ENST00000328558 471 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 RNA5SP382-201ENST00000363355 112 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CXCL1P09341 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 MIR188-201ENST00000385034 86 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CXCL1P09341 RANP6-201ENST00000413691 644 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.62□□□□□ -1.67
CXCL1P09341 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.62□□□□□ -1.67
CXCL1P09341 AC009784.1-201ENST00000426484 460 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 AL596268.1-201ENST00000427910 1048 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 MED28P4-201ENST00000433137 572 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 CUBNP2-201ENST00000443534 1139 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.62□□□□□ -1.67
CXCL1P09341 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.62□□□□□ -1.67
CXCL1P09341 RN7SL352P-201ENST00000466002 277 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL1P09341 RN7SL868P-201ENST00000485915 303 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.62□□□□□ -1.67
CXCL1P09341 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CXCL1P09341 RPL21P42-201ENST00000488408 464 ntBASIC4.62□□□□□ -1.67
CXCL1P09341 COX6B1P2-201ENST00000489624 230 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms