Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AC016739.1-201ENST00000405359 345 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 NME1P1-201ENST00000420914 382 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AP002373.2-201ENST00000541631 1060 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AC104687.2-201ENST00000604442 342 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AC010245.2-201ENST00000606908 1167 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AC092653.1-201ENST00000608509 531 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 RPL36P18-201ENST00000419316 318 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 RPL18P10-201ENST00000425606 538 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC090058.1-201ENST00000498788 435 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 PPM1AP1-201ENST00000502740 1135 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 SNORA70D-201ENST00000578836 135 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AP002799.1-201ENST00000623552 423 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 XRCC6P4-201ENST00000518193 2067 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC007842.1-201ENST00000597336 2039 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC024587.1-201ENST00000505925 2157 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 RN7SKP113-201ENST00000363891 295 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 SNORA70.4-201ENST00000365509 134 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 GSTA6P-201ENST00000424144 582 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 RPL31P44-201ENST00000447680 377 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AL389915.2-201ENST00000454576 441 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 RN7SL205P-201ENST00000490174 284 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 SNORA43.3-201ENST00000517240 103 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 RN7SL52P-201ENST00000584271 284 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AL590392.1-201ENST00000604960 446 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 RN7SL722P-201ENST00000617780 284 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 RN7SL565P-201ENST00000618246 284 ntBASIC5.66□□□□□ -1.5
CHD8Q9HCK8 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CHD8Q9HCK8 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 ARHGAP42P4-201ENST00000549782 2934 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms