Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 MTHFD2P5-201ENST00000320415 844 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC023490.2-201ENST00000359859 470 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 Y_RNA.517-201ENST00000384551 106 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 MIR27A-201ENST00000385073 78 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 RNA5SP35-201ENST00000391257 129 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 FAUP2-201ENST00000394301 401 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 ZNF603P-201ENST00000405613 487 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AL139135.1-201ENST00000412675 209 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR8G2P-201ENST00000412796 908 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 MTND4P3-201ENST00000417829 541 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 ELOCP9-201ENST00000418624 239 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AL359633.1-201ENST00000421403 310 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC009362.1-201ENST00000427253 406 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR2B8P-201ENST00000432841 938 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 RPL29P7-201ENST00000440227 457 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 MTCYBP1-201ENST00000454315 1119 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC008280.2-201ENST00000455473 307 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC008410.1-201ENST00000483777 339 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC004815.1-201ENST00000484185 331 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC026414.1-201ENST00000504046 698 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 RNU6-759P-201ENST00000516740 103 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AP003084.1-201ENST00000524828 742 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR4R3P-201ENST00000525084 838 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR5AM1P-201ENST00000532136 1032 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 OR8G3P-201ENST00000533406 921 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC005000.1-201ENST00000536192 288 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC124891.1-201ENST00000536322 519 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 MELK-208ENST00000536987 2125 ntTSL 2 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC090695.1-201ENST00000561269 1222 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC023813.2-201ENST00000564321 469 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC087481.2-201ENST00000565492 330 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 RSL24D1P11-201ENST00000591045 491 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AL356055.1-201ENST00000602528 446 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 MTND3P19-201ENST00000603825 345 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 HMGB1P51-201ENST00000605166 638 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC113361.1-201ENST00000606683 543 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AL158063.1-201ENST00000615349 536 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AL121985.2-201ENST00000621192 555 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AL133320.1-201ENST00000621423 2352 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 SALL4P7-201ENST00000555779 3120 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 KYNUP2-201ENST00000582280 1329 ntBASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 FAM133CP-201ENST00000332869 704 ntBASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 RNA5SP442-201ENST00000365050 107 ntBASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 Z86062.1-201ENST00000406773 777 ntBASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 SOD1P1-201ENST00000407803 440 ntBASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 SNORA11D-201ENST00000408548 128 ntBASIC6.02□□□□□ -1.45
SSBP3Q9BWW4 SNORA11E-201ENST00000408778 128 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms