Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MTND2P12-201ENST00000417560 1252 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 THEM7P-201ENST00000419556 672 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 NME1P1-201ENST00000420914 382 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 VN1R20P-201ENST00000425215 966 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 RPSAP32-201ENST00000432681 526 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 SOCS5P1-201ENST00000440415 949 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 CXCR2P1-202ENST00000443392 1074 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 RANP2-201ENST00000456833 229 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 AC005017.1-201ENST00000482002 490 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 EIF4E2P2-201ENST00000492033 736 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 RN7SL568P-201ENST00000493069 298 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 KHDC1P1-201ENST00000511053 508 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 OR4A41P-201ENST00000533053 928 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 NPIPB1P-202ENST00000588786 828 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 AC123769.1-201ENST00000530992 3192 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 ZNF969P-201ENST00000510345 2341 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 RN7SKP151-201ENST00000410230 316 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC092651.1-201ENST00000426110 312 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC112492.2-201ENST00000432774 1030 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 RN7SL552P-201ENST00000462094 276 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 RN7SL326P-201ENST00000477493 296 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 RPL12P31-201ENST00000478433 450 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 AL035690.1-201ENST00000490892 383 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 OR4D12P-201ENST00000509361 911 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC008429.4-201ENST00000521201 182 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 RPA2P3-201ENST00000533268 770 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC121758.1-202ENST00000556917 658 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC005632.2-201ENST00000564271 828 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 GLYATL1P2-202ENST00000588046 902 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.81□□□□□ -1.48
COL21A1Q96P44 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 AL121768.1-201ENST00000613917 2544 ntBASIC5.81□□□□□ -1.48
COL21A1Q96P44 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL21A1Q96P44 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 AC027575.3-201ENST00000583058 2747 ntBASIC5.8□□□□□ -1.48
COL21A1Q96P44 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL21A1Q96P44 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.8□□□□□ -1.48
COL21A1Q96P44 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms