Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC006509.1-201ENST00000420788 634 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 MTND2P25-201ENST00000449028 610 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 OR52I1-201ENST00000450052 1050 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 RPL7AP71-201ENST00000451120 739 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC005165.2-201ENST00000466070 380 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 UOX-201ENST00000471089 899 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 SNRPCP3-201ENST00000474888 476 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 RN7SL70P-201ENST00000478322 302 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 RN7SL382P-201ENST00000482631 282 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC010442.1-201ENST00000515583 816 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 RNU6-760P-201ENST00000516078 97 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 SNRPCP6-201ENST00000528310 210 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 OR4A42P-201ENST00000531397 938 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 SETP17-201ENST00000534163 817 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 FAM60CP-201ENST00000591086 664 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC125494.2-201ENST00000602431 657 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AL583832.1-201ENST00000603227 784 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC084824.5-201ENST00000612009 413 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 MIR6885-201ENST00000612241 66 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC004836.1-201ENST00000623032 634 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC005514.1-201ENST00000623521 208 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC022919.1-201ENST00000624979 626 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AL731556.1-201ENST00000394628 3711 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 AC007012.2-201ENST00000623206 1676 ntBASIC6.39□□□□□ -1.39
VPS50Q96JG6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.39□□□□□ -1.39
VPS50Q96JG6 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS50Q96JG6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 FAM32BP-201ENST00000344033 333 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 AL445528.1-201ENST00000426330 420 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 MRPS33P4-201ENST00000434892 317 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 AL645939.3-201ENST00000435408 225 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AL158053.1-201ENST00000441503 453 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AKR1D1P1-201ENST00000457236 936 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC112184.1-201ENST00000505179 312 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 NPM1P21-201ENST00000513394 762 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC134349.2-201ENST00000535136 910 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS50Q96JG6 AP003117.1-201ENST00000602771 554 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC110792.4-201ENST00000609843 298 ntBASIC6.38□□□□□ -1.39
VPS50Q96JG6 AC010333.3-201ENST00000615100 402 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms