Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRUB1Q8WWH5 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRUB1Q8WWH5 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRUB1Q8WWH5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRUB1Q8WWH5 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRUB1Q8WWH5 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRUB1Q8WWH5 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRUB1Q8WWH5 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.58□□□□□ -1.52
TRUB1Q8WWH5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AL158152.1-201ENST00000602652 1435 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 SNORA43.1-201ENST00000364863 140 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AC226101.1-201ENST00000401483 387 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 RN7SKP166-201ENST00000410812 305 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 RPL18AP14-201ENST00000417685 526 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 NPM1P25-201ENST00000429734 854 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 COL11A2P1-205ENST00000441798 676 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 RPS10P18-201ENST00000442662 495 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 CUBNP2-201ENST00000443534 1139 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AL845321.1-201ENST00000444603 348 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AC023271.1-201ENST00000445936 1090 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 NPM1P19-201ENST00000450070 712 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AKR1D1P1-201ENST00000457236 936 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 RN7SL326P-201ENST00000477493 296 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 NF1P12-201ENST00000549593 583 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 ADAM3B-201ENST00000569937 840 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AC011193.2-201ENST00000582638 367 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AL137067.2-201ENST00000621202 131 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 AL355480.4-201ENST00000626823 69 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRUB1Q8WWH5 MRRFP1-201ENST00000435941 1675 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AC092376.2-201ENST00000622621 4116 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 HCFC2P1-201ENST00000392864 1592 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 RNA5SP431-201ENST00000410312 120 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AC024937.2-201ENST00000411669 1242 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AC245096.1-201ENST00000413104 546 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 RPL12P10-201ENST00000413498 498 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 PHBP4-201ENST00000437447 837 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AL136455.1-201ENST00000441083 1240 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AC022080.2-201ENST00000452932 533 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 RPL5P15-201ENST00000475870 897 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AC124945.1-201ENST00000485133 188 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 EIF3LP3-201ENST00000495197 822 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 RPSAP51-201ENST00000497462 645 ntBASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.56□□□□□ -1.52
TRUB1Q8WWH5 AC093870.1-201ENST00000506837 213 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms