Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AC112243.1-201ENST00000623949 3851 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 MTCO1P25-201ENST00000414449 1799 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 CR788268.1-201ENST00000603931 1809 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 MAPK10-344ENST00000641718 3746 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 SNORD16-201ENST00000362803 99 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 RNA5SP346-201ENST00000363541 121 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 FAM204CP-201ENST00000424489 642 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 RN7SL717P-201ENST00000478343 297 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AC117395.1-201ENST00000487390 403 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 Y_RNA.667-201ENST00000516212 107 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 RNU6-943P-201ENST00000516960 98 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AC068768.2-201ENST00000602352 343 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AL133406.3-201ENST00000606817 541 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AL021368.1-201ENST00000607490 540 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AC245014.3-201ENST00000618589 347 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 AL353684.1-201ENST00000622677 1120 ntBASIC6.9□□□□□ -1.3
HERC6Q8IVU3 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HERC6Q8IVU3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HERC6Q8IVU3 AL136984.1-201ENST00000607611 1893 ntBASIC6.9□□□□□ -1.31
HERC6Q8IVU3 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC096537.2-201ENST00000413707 714 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 BX510359.3-201ENST00000422168 306 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC130360.1-201ENST00000425489 1117 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 CFL1P4-201ENST00000451536 498 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC011476.1-201ENST00000466725 307 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 RN7SL629P-201ENST00000489622 285 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC130365.2-201ENST00000525882 1201 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC245128.3-201ENST00000594721 748 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC009237.12-201ENST00000604755 742 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms