Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.04□□□□□ -1.6
PAX9P55771 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.04□□□□□ -1.6
PAX9P55771 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.04□□□□□ -1.6
PAX9P55771 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.04□□□□□ -1.6
PAX9P55771 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.04□□□□□ -1.6
PAX9P55771 AC073594.1-201ENST00000462065 364 ntBASIC5.04□□□□□ -1.6
PAX9P55771 AC025181.1-201ENST00000477507 416 ntBASIC5.04□□□□□ -1.6
PAX9P55771 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.04□□□□□ -1.6
PAX9P55771 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.04□□□□□ -1.6
PAX9P55771 ATG10-AS1-201ENST00000504846 648 ntBASIC5.04□□□□□ -1.6
PAX9P55771 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.04□□□□□ -1.6
PAX9P55771 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.04□□□□□ -1.6
PAX9P55771 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PAX9P55771 IGKV1D-32-201ENST00000517449 318 ntBASIC5.04□□□□□ -1.6
PAX9P55771 AC104997.1-201ENST00000519761 717 ntBASIC5.04□□□□□ -1.6
PAX9P55771 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PAX9P55771 OR6M2P-201ENST00000529831 871 ntBASIC5.04□□□□□ -1.6
PAX9P55771 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.04□□□□□ -1.6
PAX9P55771 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.04□□□□□ -1.6
PAX9P55771 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.04□□□□□ -1.6
PAX9P55771 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.04□□□□□ -1.6
PAX9P55771 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.04□□□□□ -1.6
PAX9P55771 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.04□□□□□ -1.6
PAX9P55771 AC025857.2-201ENST00000602711 238 ntBASIC5.04□□□□□ -1.6
PAX9P55771 DIMT1P1-201ENST00000603970 763 ntBASIC5.04□□□□□ -1.6
PAX9P55771 AC092574.1-201ENST00000609771 420 ntBASIC5.04□□□□□ -1.6
PAX9P55771 AC006924.1-201ENST00000610750 559 ntBASIC5.04□□□□□ -1.6
PAX9P55771 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.04□□□□□ -1.6
PAX9P55771 MIR6085-201ENST00000618314 110 ntBASIC5.04□□□□□ -1.6
PAX9P55771 AC106730.3-201ENST00000624568 641 ntBASIC5.04□□□□□ -1.6
PAX9P55771 AC005858.3-201ENST00000624756 589 ntBASIC5.04□□□□□ -1.6
PAX9P55771 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PAX9P55771 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.04□□□□□ -1.6
PAX9P55771 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
PAX9P55771 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PAX9P55771 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.04□□□□□ -1.6
PAX9P55771 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.04□□□□□ -1.6
PAX9P55771 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PAX9P55771 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PAX9P55771 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PAX9P55771 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.04□□□□□ -1.6
PAX9P55771 UGT2B24P-201ENST00000514441 1597 ntBASIC5.04□□□□□ -1.6
PAX9P55771 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PAX9P55771 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.03□□□□□ -1.6
PAX9P55771 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PAX9P55771 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PAX9P55771 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PAX9P55771 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PAX9P55771 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.03□□□□□ -1.6
PAX9P55771 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.03□□□□□ -1.6
PAX9P55771 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PAX9P55771 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PAX9P55771 RNU6-386P-201ENST00000362650 107 ntBASIC5.03□□□□□ -1.6
PAX9P55771 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PAX9P55771 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PAX9P55771 RN7SKP281-201ENST00000410472 352 ntBASIC5.03□□□□□ -1.6
PAX9P55771 AL157884.1-201ENST00000424561 454 ntBASIC5.03□□□□□ -1.6
PAX9P55771 IGLV3-4-201ENST00000432300 244 ntBASIC5.03□□□□□ -1.6
PAX9P55771 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.03□□□□□ -1.6
PAX9P55771 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.03□□□□□ -1.6
PAX9P55771 RPS10P28-201ENST00000480396 498 ntBASIC5.03□□□□□ -1.6
PAX9P55771 RPL37AP8-201ENST00000494116 276 ntBASIC5.03□□□□□ -1.6
PAX9P55771 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.03□□□□□ -1.6
PAX9P55771 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.03□□□□□ -1.6
PAX9P55771 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.03□□□□□ -1.6
PAX9P55771 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.03□□□□□ -1.6
PAX9P55771 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.03□□□□□ -1.6
PAX9P55771 NPM1P21-201ENST00000513394 762 ntBASIC5.03□□□□□ -1.6
PAX9P55771 AP005902.2-201ENST00000518393 307 ntBASIC5.03□□□□□ -1.6
PAX9P55771 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.03□□□□□ -1.6
PAX9P55771 KCTD9P6-201ENST00000522306 950 ntBASIC5.03□□□□□ -1.6
PAX9P55771 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.03□□□□□ -1.6
PAX9P55771 OR4A42P-201ENST00000531397 938 ntBASIC5.03□□□□□ -1.6
PAX9P55771 RPA2P3-201ENST00000533268 770 ntBASIC5.03□□□□□ -1.6
PAX9P55771 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.03□□□□□ -1.6
PAX9P55771 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.03□□□□□ -1.6
PAX9P55771 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.03□□□□□ -1.6
PAX9P55771 AC026956.1-201ENST00000558741 396 ntBASIC5.03□□□□□ -1.6
PAX9P55771 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.03□□□□□ -1.6
PAX9P55771 RN7SL426P-201ENST00000579106 295 ntBASIC5.03□□□□□ -1.6
PAX9P55771 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.03□□□□□ -1.6
PAX9P55771 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.03□□□□□ -1.6
PAX9P55771 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.03□□□□□ -1.6
PAX9P55771 AC090241.1-201ENST00000587732 621 ntBASIC5.03□□□□□ -1.6
PAX9P55771 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.03□□□□□ -1.6
PAX9P55771 AL589863.1-201ENST00000595383 631 ntBASIC5.03□□□□□ -1.6
PAX9P55771 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.03□□□□□ -1.6
PAX9P55771 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.03□□□□□ -1.6
PAX9P55771 AC009283.1-201ENST00000615852 645 ntBASIC5.03□□□□□ -1.6
PAX9P55771 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PAX9P55771 AC103564.3-201ENST00000621194 220 ntBASIC5.03□□□□□ -1.6
PAX9P55771 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.03□□□□□ -1.6
PAX9P55771 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PAX9P55771 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PAX9P55771 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.03□□□□□ -1.6
PAX9P55771 AC097063.1-201ENST00000426714 1797 ntBASIC5.03□□□□□ -1.6
PAX9P55771 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.03□□□□□ -1.6
PAX9P55771 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.03□□□□□ -1.6
PAX9P55771 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PAX9P55771 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms