Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.95□□□□□ -1.46
PKNOX1P55347 RPL23AP40-201ENST00000487630 390 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.95□□□□□ -1.46
PKNOX1P55347 RN7SL104P-201ENST00000498686 293 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AC025470.1-201ENST00000510053 2032 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AC011416.1-201ENST00000514947 1732 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.95□□□□□ -1.46
PKNOX1P55347 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.95□□□□□ -1.46
PKNOX1P55347 RNU4ATAC-201ENST00000580972 127 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.95□□□□□ -1.46
PKNOX1P55347 RN7SL261P-201ENST00000613441 282 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AP000432.2-201ENST00000624164 2048 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AL162456.1-201ENST00000634535 2006 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 AP001153.1-201ENST00000641024 338 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AL133243.2-201ENST00000610331 1621 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PKNOX1P55347 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PKNOX1P55347 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PKNOX1P55347 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC004656.1-201ENST00000568479 4951 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 AL049634.1-201ENST00000453770 1720 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 SNORA77.2-201ENST00000408571 112 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 RN7SKP166-201ENST00000410812 305 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.94□□□□□ -1.46
PKNOX1P55347 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.94□□□□□ -1.46
PKNOX1P55347 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 GAPDHP19-201ENST00000431768 1005 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PKNOX1P55347 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC124945.1-201ENST00000485133 188 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC093325.1-201ENST00000508378 326 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 RNA5SP206-201ENST00000516703 121 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 NATP-201ENST00000523491 878 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.94□□□□□ -1.46
PKNOX1P55347 AL589765.6-201ENST00000601909 549 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 AL583832.1-201ENST00000603227 784 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 MIR6883-201ENST00000614952 78 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 MAPK10-350ENST00000641777 965 ntBASIC5.94□□□□□ -1.46
PKNOX1P55347 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PKNOX1P55347 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PKNOX1P55347 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.94□□□□□ -1.46
PKNOX1P55347 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.94□□□□□ -1.46
PKNOX1P55347 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
PKNOX1P55347 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKNOX1P55347 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.93□□□□□ -1.46
PKNOX1P55347 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.93□□□□□ -1.46
PKNOX1P55347 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
PKNOX1P55347 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PKNOX1P55347 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AL157702.1-201ENST00000398764 426 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 RN7SKP17-201ENST00000411242 351 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 288.5 ms