Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AP005137.2-201ENST00000609238 400 ntBASIC7.56□□□□□ -1.2
RNF144AP50876 AL160413.1-201ENST00000622780 310 ntBASIC7.56□□□□□ -1.2
RNF144AP50876 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RNF144AP50876 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF144AP50876 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RNF144AP50876 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF144AP50876 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF144AP50876 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF144AP50876 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RNF144AP50876 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF144AP50876 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RNF144AP50876 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 AL034370.1-201ENST00000397254 1590 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF144AP50876 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.55□□□□□ -1.2
RNF144AP50876 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
RNF144AP50876 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF144AP50876 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RNF144AP50876 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
RNF144AP50876 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF144AP50876 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 USP9YP27-201ENST00000418455 438 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC114760.1-201ENST00000420310 652 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 TRIM43CP-201ENST00000422468 1028 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 Z74696.1-201ENST00000428208 1123 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 FO393419.3-201ENST00000428741 282 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 YWHAEP5-201ENST00000431545 765 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 ACTBP12-201ENST00000435871 418 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 DNAJA1P6-201ENST00000437347 354 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC239367.1-201ENST00000439389 936 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 ASS1P4-201ENST00000439462 1234 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 TRAPPC2P8-201ENST00000440676 396 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 OR2AI1P-201ENST00000448534 932 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 GAPDHP28-201ENST00000455134 1003 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC004801.2-201ENST00000468202 779 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC018695.1-201ENST00000484096 664 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC096576.1-201ENST00000489014 359 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 RN7SL130P-201ENST00000489463 305 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 RN7SL464P-201ENST00000492743 297 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 RPL36P16-201ENST00000496996 306 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC108078.1-201ENST00000508073 725 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 KRT18P54-201ENST00000513396 748 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 RNA5SP460-201ENST00000516789 100 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC087360.1-201ENST00000518788 616 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC008802.1-201ENST00000519121 791 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC087808.1-201ENST00000520501 361 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.55□□□□□ -1.2
RNF144AP50876 AC091175.1-201ENST00000522168 572 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.55□□□□□ -1.2
RNF144AP50876 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AP001893.2-201ENST00000526949 202 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC7.55□□□□□ -1.2
RNF144AP50876 OR4A11P-201ENST00000529557 906 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.55□□□□□ -1.2
RNF144AP50876 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.55□□□□□ -1.2
RNF144AP50876 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF144AP50876 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF144AP50876 AL109936.2-201ENST00000605350 650 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF144AP50876 AC008121.3-201ENST00000618726 433 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 AL034408.1-201ENST00000637712 664 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF144AP50876 OR8B9P-202ENST00000642028 5216 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms