Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-1P43699 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 TRIM53CP-201ENST00000531490 1354 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-1P43699 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.16□□□□□ -1.58
NKX2-1P43699 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.16□□□□□ -1.58
NKX2-1P43699 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 AC239868.2-201ENST00000564237 4527 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AL121768.1-201ENST00000613917 2544 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-1P43699 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NKX2-1P43699 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NKX2-1P43699 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NKX2-1P43699 RNA5SP321-201ENST00000362722 111 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 SNORD1C-201ENST00000363315 78 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
NKX2-1P43699 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
NKX2-1P43699 MIR433-201ENST00000384837 93 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 RNA5SP176-201ENST00000390956 110 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NKX2-1P43699 RPL5P20-201ENST00000403848 896 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 RN7SKP17-201ENST00000411242 351 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 AL590399.2-201ENST00000427536 309 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-1P43699 MTCO1P45-201ENST00000431457 267 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 SDR42E1P3-201ENST00000438345 502 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.16□□□□□ -1.58
NKX2-1P43699 SNRPFP2-201ENST00000440710 251 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AL353803.3-201ENST00000444641 335 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 RPL7AP71-201ENST00000451120 739 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 VPS25P1-201ENST00000455691 508 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-1P43699 AC079193.1-201ENST00000460497 588 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AC025271.1-201ENST00000485045 429 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AC010409.2-201ENST00000505780 478 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 COL6A4P2-205ENST00000509855 506 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 RNU6-491P-201ENST00000516099 110 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.16□□□□□ -1.58
NKX2-1P43699 OR8K2P-201ENST00000524645 927 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.16□□□□□ -1.58
NKX2-1P43699 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-1P43699 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-1P43699 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 HMGN2P47-201ENST00000559378 272 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 MIR3189-201ENST00000578735 73 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-1P43699 AC090616.1-201ENST00000583895 447 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.16□□□□□ -1.58
NKX2-1P43699 ADAD1P2-201ENST00000588476 646 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.16□□□□□ -1.58
NKX2-1P43699 DIMT1P1-201ENST00000603970 763 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AL008723.3-201ENST00000608926 449 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 AL592494.3-201ENST00000609485 464 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 MIR6736-201ENST00000616799 59 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NKX2-1P43699 AC096921.2-201ENST00000561507 1916 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 AL359955.1-201ENST00000455242 3275 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
NKX2-1P43699 GUCY1B2-204ENST00000531898 1979 ntBASIC5.16□□□□□ -1.58
NKX2-1P43699 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NKX2-1P43699 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NKX2-1P43699 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.16□□□□□ -1.58
NKX2-1P43699 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-1P43699 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-1P43699 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.15□□□□□ -1.58
NKX2-1P43699 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-1P43699 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NKX2-1P43699 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-1P43699 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.15□□□□□ -1.58
NKX2-1P43699 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms