Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 HSD3BP3-201ENST00000514706 994 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.04□□□□□ -1.44
SHMT2P34897 AC084121.1-201ENST00000533882 835 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.04□□□□□ -1.44
SHMT2P34897 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.04□□□□□ -1.44
SHMT2P34897 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.04□□□□□ -1.44
SHMT2P34897 AC002310.3-201ENST00000569728 723 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 MIR4502-201ENST00000580432 81 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 MIR4271-201ENST00000582451 67 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.04□□□□□ -1.44
SHMT2P34897 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 AC073592.6-201ENST00000624271 415 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 AC073488.6-201ENST00000632293 754 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 AC119674.1-217ENST00000641942 1086 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHMT2P34897 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
SHMT2P34897 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHMT2P34897 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.04□□□□□ -1.44
SHMT2P34897 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.04□□□□□ -1.44
SHMT2P34897 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.04□□□□□ -1.44
SHMT2P34897 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SHMT2P34897 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SHMT2P34897 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SHMT2P34897 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.03□□□□□ -1.44
SHMT2P34897 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.03□□□□□ -1.44
SHMT2P34897 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.03□□□□□ -1.44
SHMT2P34897 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHMT2P34897 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
SHMT2P34897 AC107977.1-201ENST00000355745 939 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 RN7SKP108-201ENST00000411367 328 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 PSMD10P2-201ENST00000432890 672 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 DNAJC19P5-201ENST00000443295 316 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.03□□□□□ -1.44
SHMT2P34897 AC128716.1-201ENST00000475129 166 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 RPL34P33-201ENST00000486062 334 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 RNA5SP473-201ENST00000516402 125 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.03□□□□□ -1.44
SHMT2P34897 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.03□□□□□ -1.44
SHMT2P34897 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.03□□□□□ -1.44
SHMT2P34897 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.03□□□□□ -1.44
SHMT2P34897 AL845552.1-201ENST00000556820 323 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.03□□□□□ -1.44
SHMT2P34897 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.03□□□□□ -1.44
SHMT2P34897 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.03□□□□□ -1.44
SHMT2P34897 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.03□□□□□ -1.44
SHMT2P34897 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.03□□□□□ -1.44
SHMT2P34897 AL591167.1-201ENST00000607321 456 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 AL080312.2-201ENST00000613001 630 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 FAM27E2-201ENST00000619668 403 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 AC073593.1-201ENST00000624500 411 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.03□□□□□ -1.44
SHMT2P34897 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.03□□□□□ -1.44
SHMT2P34897 AC092724.1-201ENST00000624623 3397 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 AL133243.2-201ENST00000610331 1621 ntBASIC6.03□□□□□ -1.44
SHMT2P34897 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHMT2P34897 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SHMT2P34897 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
SHMT2P34897 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
SHMT2P34897 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHMT2P34897 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHMT2P34897 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.02□□□□□ -1.45
SHMT2P34897 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHMT2P34897 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHMT2P34897 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHMT2P34897 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.02□□□□□ -1.45
SHMT2P34897 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.02□□□□□ -1.45
SHMT2P34897 RNU6-316P-201ENST00000391027 107 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 VN1R12P-201ENST00000403778 876 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 GCNT1P4-201ENST00000404096 329 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 RPS7P8-201ENST00000418311 581 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 AL354707.3-201ENST00000427308 331 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.02□□□□□ -1.45
SHMT2P34897 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.02□□□□□ -1.45
SHMT2P34897 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.02□□□□□ -1.45
SHMT2P34897 Vault.2-201ENST00000516519 98 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 Y_RNA.710-201ENST00000516975 110 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.02□□□□□ -1.45
SHMT2P34897 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.02□□□□□ -1.45
SHMT2P34897 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.02□□□□□ -1.45
SHMT2P34897 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.02□□□□□ -1.45
SHMT2P34897 MRPS21P8-201ENST00000569196 235 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 MIR4701-201ENST00000583094 63 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms