Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 FAM72A-208ENST00000607379 1139 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXA9P31269 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
HOXA9P31269 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 WBP11P1-201ENST00000562560 1931 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXA9P31269 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HOXA9P31269 GUCY1B2-204ENST00000531898 1979 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXA9P31269 MTCO1P11-201ENST00000429111 1528 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
HOXA9P31269 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXA9P31269 AL136531.3-201ENST00000624378 3658 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXA9P31269 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXA9P31269 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
HOXA9P31269 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXA9P31269 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXA9P31269 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXA9P31269 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXA9P31269 AL445238.1-204ENST00000400311 463 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 RPS3AP2-201ENST00000407190 754 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXA9P31269 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXA9P31269 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXA9P31269 TUBB4BP6-201ENST00000437576 479 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXA9P31269 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXA9P31269 CT45A11P-201ENST00000448043 1134 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 AP006222.1-205ENST00000450734 457 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 AL445665.1-202ENST00000452436 324 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 AL122020.1-201ENST00000472287 459 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXA9P31269 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXA9P31269 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXA9P31269 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.45□□□□□ -1.38
HOXA9P31269 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXA9P31269 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXA9P31269 ZNF322P1-201ENST00000568013 1209 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 AC020978.7-201ENST00000575953 1187 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXA9P31269 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXA9P31269 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.45□□□□□ -1.38
HOXA9P31269 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXA9P31269 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXA9P31269 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HOXA9P31269 AC022034.1-201ENST00000512867 2156 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXA9P31269 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXA9P31269 CIR1P2-201ENST00000514821 1342 ntBASIC6.45□□□□□ -1.38
HOXA9P31269 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXA9P31269 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
HOXA9P31269 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA9P31269 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXA9P31269 RNF19BPY-201ENST00000458209 1550 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA9P31269 OR13C1P-202ENST00000641378 2919 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA9P31269 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXA9P31269 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXA9P31269 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HOXA9P31269 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA9P31269 OR11H13P-201ENST00000359695 979 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 SDHDP6-201ENST00000414693 480 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.44□□□□□ -1.38
HOXA9P31269 UBE2V1P14-201ENST00000415815 558 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.44□□□□□ -1.38
HOXA9P31269 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXA9P31269 AC079355.1-201ENST00000421770 223 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 NPM1P25-201ENST00000429734 854 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 AL355355.1-201ENST00000442900 793 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 AL445466.1-201ENST00000448432 357 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXA9P31269 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXA9P31269 GEMIN2P1-201ENST00000454246 752 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 RPS27AP2-201ENST00000457576 465 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 AC114781.3-201ENST00000512083 142 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA9P31269 TMEM97P2-201ENST00000517841 403 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXA9P31269 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA9P31269 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXA9P31269 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.44□□□□□ -1.38
HOXA9P31269 AL683813.2-201ENST00000605245 502 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 AC012254.5-201ENST00000623573 478 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 ZNF969P-201ENST00000510345 2341 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 PSG10P-201ENST00000501199 1500 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA9P31269 GNL2P1-201ENST00000451274 2190 ntBASIC6.44□□□□□ -1.38
HOXA9P31269 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA9P31269 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
HOXA9P31269 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA9P31269 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA9P31269 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA9P31269 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA9P31269 RBPJP7-201ENST00000442803 1447 ntBASIC6.43□□□□□ -1.38
HOXA9P31269 RBPJP5-201ENST00000449433 1447 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms