Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MIR7159-201ENST00000620587 66 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN6P29350 BRAFP1-201ENST00000445336 2703 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PTPN6P29350 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN6P29350 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN6P29350 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN6P29350 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN6P29350 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
PTPN6P29350 LINC01613-201ENST00000561476 2780 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 AC018628.1-201ENST00000624147 3819 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN6P29350 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN6P29350 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN6P29350 GNG5P2-201ENST00000372054 207 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN6P29350 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.9□□□□□ -1.46
PTPN6P29350 RPS7P14-201ENST00000426405 583 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 GAPDHP34-201ENST00000432112 823 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 GTF3AP6-201ENST00000432585 986 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 AL590399.4-201ENST00000436561 601 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN6P29350 GTF2IP14-201ENST00000441415 586 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 MORF4-201ENST00000447135 971 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN6P29350 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PTPN6P29350 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN6P29350 AC117500.1-201ENST00000497352 755 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 RNA5SP400-201ENST00000517155 111 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.9□□□□□ -1.46
PTPN6P29350 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN6P29350 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.9□□□□□ -1.46
PTPN6P29350 AC026898.1-201ENST00000586404 571 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN6P29350 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN6P29350 AL352984.2-201ENST00000611153 546 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 AL352984.2-202ENST00000613699 155 ntBASIC5.9□□□□□ -1.46
PTPN6P29350 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.9□□□□□ -1.46
PTPN6P29350 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN6P29350 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN6P29350 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN6P29350 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.9□□□□□ -1.47
PTPN6P29350 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.9□□□□□ -1.47
PTPN6P29350 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
PTPN6P29350 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN6P29350 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.9□□□□□ -1.47
PTPN6P29350 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.9□□□□□ -1.47
PTPN6P29350 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PTPN6P29350 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN6P29350 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN6P29350 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN6P29350 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN6P29350 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN6P29350 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN6P29350 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN6P29350 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN6P29350 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTPN6P29350 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTPN6P29350 RPL24P2-201ENST00000421023 475 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PTPN6P29350 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN6P29350 RPSAP32-201ENST00000432681 526 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN6P29350 AC016908.1-201ENST00000442571 1219 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN6P29350 AC007383.1-201ENST00000445875 636 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 COX4I1P2-201ENST00000447446 547 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AC112187.1-201ENST00000455837 479 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AC019084.1-201ENST00000457337 432 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AC073594.1-201ENST00000462065 364 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 RN7SL714P-201ENST00000487050 298 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN6P29350 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN6P29350 AC010343.2-201ENST00000510162 224 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN6P29350 AC093816.1-201ENST00000515076 913 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN6P29350 SNORA74.1-201ENST00000516320 180 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN6P29350 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN6P29350 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN6P29350 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN6P29350 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN6P29350 AC004890.3-201ENST00000605566 1095 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 RPL12P48-201ENST00000605620 304 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AL138960.1-201ENST00000613838 513 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 uc_338.29-201ENST00000615099 168 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN6P29350 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN6P29350 AL596275.2-207ENST00000641188 675 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN6P29350 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
PTPN6P29350 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PTPN6P29350 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms