Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
BDNFP23560 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.8□□□□□ -1.32
BDNFP23560 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 AL359976.1-201ENST00000418655 3528 ntBASIC6.79□□□□□ -1.32
BDNFP23560 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 RNA5SP514-201ENST00000363717 111 ntBASIC6.79□□□□□ -1.32
BDNFP23560 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
BDNFP23560 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 AL023284.3-201ENST00000407767 334 ntBASIC6.79□□□□□ -1.32
BDNFP23560 RNA5SP198-201ENST00000410376 127 ntBASIC6.79□□□□□ -1.32
BDNFP23560 CYCSP52-201ENST00000422857 310 ntBASIC6.79□□□□□ -1.32
BDNFP23560 AL157884.1-201ENST00000424561 454 ntBASIC6.79□□□□□ -1.32
BDNFP23560 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.79□□□□□ -1.32
BDNFP23560 GAPDHP59-201ENST00000435908 267 ntBASIC6.79□□□□□ -1.32
BDNFP23560 PMS2P9-201ENST00000441237 515 ntBASIC6.79□□□□□ -1.32
BDNFP23560 AL356390.1-201ENST00000455684 397 ntBASIC6.79□□□□□ -1.32
BDNFP23560 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.79□□□□□ -1.32
BDNFP23560 OR9A1P-202ENST00000484361 945 ntBASIC6.79□□□□□ -1.32
BDNFP23560 AK4P6-201ENST00000505168 528 ntBASIC6.79□□□□□ -1.32
BDNFP23560 UGT2A3P7-201ENST00000510485 734 ntBASIC6.79□□□□□ -1.32
BDNFP23560 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.79□□□□□ -1.32
BDNFP23560 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 AP000859.1-201ENST00000525536 307 ntBASIC6.79□□□□□ -1.32
BDNFP23560 EIF4A2P5-201ENST00000529914 499 ntBASIC6.79□□□□□ -1.32
BDNFP23560 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.79□□□□□ -1.32
BDNFP23560 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.79□□□□□ -1.32
BDNFP23560 AL078601.3-201ENST00000573303 535 ntBASIC6.79□□□□□ -1.32
BDNFP23560 NPM1P45-201ENST00000583151 559 ntBASIC6.79□□□□□ -1.32
BDNFP23560 AC090616.1-201ENST00000583895 447 ntBASIC6.79□□□□□ -1.32
BDNFP23560 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.79□□□□□ -1.32
BDNFP23560 AL135999.3-201ENST00000610501 812 ntBASIC6.79□□□□□ -1.32
BDNFP23560 MIR7109-201ENST00000613748 65 ntBASIC6.79□□□□□ -1.32
BDNFP23560 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 AC010168.2-201ENST00000562691 5428 ntBASIC6.79□□□□□ -1.32
BDNFP23560 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.79□□□□□ -1.32
BDNFP23560 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 FO082842.1-201ENST00000423552 1370 ntBASIC6.79□□□□□ -1.32
BDNFP23560 AC010624.4-201ENST00000597606 1351 ntBASIC6.79□□□□□ -1.32
BDNFP23560 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
BDNFP23560 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
BDNFP23560 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
BDNFP23560 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.78□□□□□ -1.32
BDNFP23560 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.78□□□□□ -1.32
BDNFP23560 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
BDNFP23560 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
BDNFP23560 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.78□□□□□ -1.32
BDNFP23560 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.78□□□□□ -1.32
BDNFP23560 TTC39DP-201ENST00000416781 1688 ntBASIC6.78□□□□□ -1.32
BDNFP23560 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
BDNFP23560 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
BDNFP23560 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
BDNFP23560 AC010132.2-201ENST00000295493 1043 ntBASIC6.78□□□□□ -1.32
BDNFP23560 RNU1-65P-201ENST00000363919 148 ntBASIC6.78□□□□□ -1.32
BDNFP23560 AC104297.1-201ENST00000393779 870 ntBASIC6.78□□□□□ -1.32
BDNFP23560 CXADRP1-201ENST00000398098 1095 ntBASIC6.78□□□□□ -1.32
BDNFP23560 AL139039.2-201ENST00000407436 479 ntBASIC6.78□□□□□ -1.32
BDNFP23560 AKR1B10P1-201ENST00000425765 942 ntBASIC6.78□□□□□ -1.32
BDNFP23560 AC099782.1-201ENST00000425889 474 ntBASIC6.78□□□□□ -1.32
BDNFP23560 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.78□□□□□ -1.32
BDNFP23560 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.78□□□□□ -1.32
BDNFP23560 Z84478.1-201ENST00000438230 1219 ntBASIC6.78□□□□□ -1.32
BDNFP23560 EMC3-AS1-205ENST00000438698 534 ntBASIC6.78□□□□□ -1.32
BDNFP23560 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
BDNFP23560 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.78□□□□□ -1.32
BDNFP23560 CXCR2P1-202ENST00000443392 1074 ntBASIC6.78□□□□□ -1.32
BDNFP23560 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.78□□□□□ -1.32
BDNFP23560 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.78□□□□□ -1.32
BDNFP23560 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.78□□□□□ -1.32
BDNFP23560 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.78□□□□□ -1.32
BDNFP23560 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.78□□□□□ -1.32
BDNFP23560 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.78□□□□□ -1.32
BDNFP23560 RN7SL362P-201ENST00000494228 267 ntBASIC6.78□□□□□ -1.32
BDNFP23560 NPM1P27-201ENST00000502784 830 ntBASIC6.78□□□□□ -1.32
BDNFP23560 PSMA2P2-201ENST00000504319 686 ntBASIC6.78□□□□□ -1.32
BDNFP23560 AC091965.3-201ENST00000506236 208 ntBASIC6.78□□□□□ -1.32
BDNFP23560 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.78□□□□□ -1.32
BDNFP23560 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
BDNFP23560 RNA5SP206-201ENST00000516703 121 ntBASIC6.78□□□□□ -1.32
BDNFP23560 AC009879.1-201ENST00000520029 839 ntBASIC6.78□□□□□ -1.32
BDNFP23560 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.78□□□□□ -1.32
BDNFP23560 AC027281.1-201ENST00000574178 758 ntBASIC6.78□□□□□ -1.32
BDNFP23560 MIR5095-201ENST00000578844 88 ntBASIC6.78□□□□□ -1.32
BDNFP23560 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.78□□□□□ -1.32
BDNFP23560 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.78□□□□□ -1.32
BDNFP23560 uc_338.31-201ENST00000615595 186 ntBASIC6.78□□□□□ -1.32
BDNFP23560 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.78□□□□□ -1.32
BDNFP23560 CXADRP3-202ENST00000617265 1100 ntBASIC6.78□□□□□ -1.32
BDNFP23560 MIR6811-201ENST00000620409 58 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms