Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 AP001267.4-201ENST00000602598 545 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AP001981.2-201ENST00000603241 418 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AL137072.1-201ENST00000603444 466 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC018714.1-201ENST00000605028 208 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC112220.3-201ENST00000605502 502 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC025031.3-201ENST00000611566 368 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC007336.2-201ENST00000611626 557 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC008083.4-201ENST00000615076 444 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC215522.1-201ENST00000615488 446 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC067904.3-201ENST00000617126 261 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ATF4P18848 AC013489.3-201ENST00000623274 517 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC010223.1-201ENST00000625092 279 ntBASIC6.53□□□□□ -1.36
ATF4P18848 HLA-B-257ENST00000640094 147 ntBASIC6.53□□□□□ -1.36
ATF4P18848 VEZF1P1-201ENST00000423931 1541 ntBASIC6.53□□□□□ -1.36
ATF4P18848 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC6.52□□□□□ -1.36
ATF4P18848 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 AC007342.5-201ENST00000571340 2142 ntBASIC6.52□□□□□ -1.37
ATF4P18848 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 AL512646.1-201ENST00000269395 1077 ntBASIC6.52□□□□□ -1.37
ATF4P18848 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 Y_RNA.18-201ENST00000362461 102 ntBASIC6.52□□□□□ -1.37
ATF4P18848 MT-TH-201ENST00000387441 69 ntBASIC6.52□□□□□ -1.37
ATF4P18848 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 RNU6-648P-201ENST00000410190 107 ntBASIC6.52□□□□□ -1.37
ATF4P18848 DYNLL1P7-201ENST00000429273 258 ntBASIC6.52□□□□□ -1.37
ATF4P18848 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 MED14P1-201ENST00000430517 648 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 AC105052.2-201ENST00000434317 794 ntBASIC6.52□□□□□ -1.37
ATF4P18848 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 AC006463.1-201ENST00000445929 232 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 MTND2P19-201ENST00000449129 1012 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 AL391825.1-202ENST00000458136 741 ntBASIC6.52□□□□□ -1.37
ATF4P18848 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 RN7SKP198-201ENST00000459286 306 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 PLA2G12AP1-201ENST00000497678 568 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 AC093281.2-201ENST00000510153 597 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AC073848.1-201ENST00000514339 457 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 RN7SKP31-201ENST00000516354 278 ntBASIC6.52□□□□□ -1.37
ATF4P18848 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 HIGD1AP6-201ENST00000521833 279 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 ZNF123P-201ENST00000531501 1196 ntBASIC6.52□□□□□ -1.37
ATF4P18848 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.52□□□□□ -1.37
ATF4P18848 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.52□□□□□ -1.37
ATF4P18848 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC6.52□□□□□ -1.37
ATF4P18848 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ATF4P18848 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 RN7SL474P-201ENST00000583485 301 ntBASIC6.52□□□□□ -1.37
ATF4P18848 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms