Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 WBP11P1-201ENST00000562560 1931 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHRNA1P02708 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHRNA1P02708 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHRNA1P02708 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHRNA1P02708 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CHRNA1P02708 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.72□□□□□ -1.33
CHRNA1P02708 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 BIN2P1-201ENST00000504996 1530 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CHRNA1P02708 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.72□□□□□ -1.33
CHRNA1P02708 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 RNA5SP178-201ENST00000410380 128 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.72□□□□□ -1.33
CHRNA1P02708 RPL35AP3-201ENST00000414680 288 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.72□□□□□ -1.33
CHRNA1P02708 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.72□□□□□ -1.33
CHRNA1P02708 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.72□□□□□ -1.33
CHRNA1P02708 KATNBL1P2-201ENST00000433311 835 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.72□□□□□ -1.33
CHRNA1P02708 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.72□□□□□ -1.33
CHRNA1P02708 AC092865.4-201ENST00000477936 615 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.72□□□□□ -1.33
CHRNA1P02708 AP000648.1-201ENST00000529682 397 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.72□□□□□ -1.33
CHRNA1P02708 MIR5095-201ENST00000578844 88 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.72□□□□□ -1.33
CHRNA1P02708 AC233702.7-202ENST00000582941 211 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.72□□□□□ -1.33
CHRNA1P02708 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.72□□□□□ -1.33
CHRNA1P02708 AL031601.1-201ENST00000605702 394 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CHRNA1P02708 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 AC024587.1-201ENST00000505925 2157 ntBASIC6.72□□□□□ -1.33
CHRNA1P02708 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.72□□□□□ -1.33
CHRNA1P02708 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.72□□□□□ -1.33
CHRNA1P02708 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
CHRNA1P02708 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA1P02708 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
CHRNA1P02708 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.71□□□□□ -1.33
CHRNA1P02708 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.71□□□□□ -1.33
CHRNA1P02708 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CHRNA1P02708 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.71□□□□□ -1.33
CHRNA1P02708 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.71□□□□□ -1.33
CHRNA1P02708 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CHRNA1P02708 AC015689.2-201ENST00000528172 1738 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CHRNA1P02708 RNA5SP242-201ENST00000364171 118 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 MIR433-201ENST00000384837 93 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 EEF1B2P8-201ENST00000414101 671 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.71□□□□□ -1.34
CHRNA1P02708 UBE2V1P14-201ENST00000415815 558 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 RPS7P8-201ENST00000418311 581 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 AC097721.1-201ENST00000427150 1253 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 AL512593.1-201ENST00000444758 779 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 RPL36AP39-201ENST00000445859 318 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 HMGN1P36-201ENST00000446623 298 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 AL445466.1-201ENST00000448432 357 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.71□□□□□ -1.34
CHRNA1P02708 RN7SL269P-201ENST00000467795 305 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 RN7SL214P-201ENST00000487317 265 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CHRNA1P02708 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.71□□□□□ -1.34
CHRNA1P02708 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CHRNA1P02708 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.71□□□□□ -1.34
CHRNA1P02708 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
CHRNA1P02708 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.71□□□□□ -1.34
CHRNA1P02708 FAM72A-208ENST00000607379 1139 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 MIR6768-201ENST00000610734 72 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 AC096861.1-201ENST00000616652 240 ntBASIC6.71□□□□□ -1.34
CHRNA1P02708 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.71□□□□□ -1.34
CHRNA1P02708 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
CHRNA1P02708 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA1P02708 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.71□□□□□ -1.34
CHRNA1P02708 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.71□□□□□ -1.34
CHRNA1P02708 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.71□□□□□ -1.34
CHRNA1P02708 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA1P02708 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA1P02708 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA1P02708 TNPO1P2-201ENST00000426249 2665 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms